Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF346Q9UL40 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF346Q9UL40 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
ZNF346Q9UL40 C9orf163-202ENST00000624034 2573 ntBASIC20.55■□□□□ 0.88
ZNF346Q9UL40 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF346Q9UL40 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 AL022069.1-201ENST00000568025 1636 ntBASIC20.54■□□□□ 0.88
ZNF346Q9UL40 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 AC120024.1-201ENST00000562672 995 ntBASIC20.54■□□□□ 0.88
ZNF346Q9UL40 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF346Q9UL40 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZNF346Q9UL40 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ZNF346Q9UL40 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF346Q9UL40 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF346Q9UL40 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 AC131274.2-201ENST00000580697 1507 ntBASIC20.51■□□□□ 0.87
ZNF346Q9UL40 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF346Q9UL40 DUSP8P5-201ENST00000422884 1815 ntBASIC20.5■□□□□ 0.87
ZNF346Q9UL40 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 KRT18P24-201ENST00000344739 1156 ntBASIC20.5■□□□□ 0.87
ZNF346Q9UL40 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF346Q9UL40 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF346Q9UL40 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF346Q9UL40 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF346Q9UL40 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF346Q9UL40 THA1P-201ENST00000590384 1145 ntBASIC20.48■□□□□ 0.87
ZNF346Q9UL40 AC068473.5-201ENST00000616428 2072 ntBASIC20.48■□□□□ 0.87
ZNF346Q9UL40 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF346Q9UL40 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF346Q9UL40 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF346Q9UL40 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF346Q9UL40 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF346Q9UL40 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
ZNF346Q9UL40 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms