Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
SLC52A1Q9NWF4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
SLC52A1Q9NWF4 SLC6A10P-202ENST00000431994 2058 ntBASIC33.29■■■□□ 2.92
SLC52A1Q9NWF4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
SLC52A1Q9NWF4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SLC52A1Q9NWF4 BX842568.3-201ENST00000418104 571 ntBASIC33.29■■■□□ 2.92
SLC52A1Q9NWF4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC33.29■■■□□ 2.92
SLC52A1Q9NWF4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 AC092803.2-201ENST00000564287 1899 ntBASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC33.28■■■□□ 2.92
SLC52A1Q9NWF4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 AC006455.2-201ENST00000429931 906 ntBASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC33.27■■■□□ 2.92
SLC52A1Q9NWF4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
SLC52A1Q9NWF4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
SLC52A1Q9NWF4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SLC52A1Q9NWF4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SLC52A1Q9NWF4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SLC52A1Q9NWF4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC33.26■■■□□ 2.91
SLC52A1Q9NWF4 MIR3181-201ENST00000578512 73 ntBASIC33.25■■■□□ 2.91
SLC52A1Q9NWF4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
SLC52A1Q9NWF4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SLC52A1Q9NWF4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC33.25■■■□□ 2.91
SLC52A1Q9NWF4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SLC52A1Q9NWF4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC33.24■■■□□ 2.91
SLC52A1Q9NWF4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SLC52A1Q9NWF4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
SLC52A1Q9NWF4 AK1-201ENST00000223836 736 ntTSL 3 BASIC33.23■■■□□ 2.91
SLC52A1Q9NWF4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC33.23■■■□□ 2.91
SLC52A1Q9NWF4 SP2-202ENST00000613139 908 ntTSL 5 BASIC33.23■■■□□ 2.91
SLC52A1Q9NWF4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC33.23■■■□□ 2.91
SLC52A1Q9NWF4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
SLC52A1Q9NWF4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SLC52A1Q9NWF4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC33.22■■■□□ 2.91
SLC52A1Q9NWF4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SLC52A1Q9NWF4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC33.22■■■□□ 2.91
SLC52A1Q9NWF4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
SLC52A1Q9NWF4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SLC52A1Q9NWF4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SLC52A1Q9NWF4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SLC52A1Q9NWF4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC33.21■■■□□ 2.91
SLC52A1Q9NWF4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC33.2■■■□□ 2.91
SLC52A1Q9NWF4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.9
SLC52A1Q9NWF4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC33.2■■■□□ 2.9
SLC52A1Q9NWF4 AC009086.3-201ENST00000623486 1008 ntBASIC33.19■■■□□ 2.9
SLC52A1Q9NWF4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
SLC52A1Q9NWF4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC33.19■■■□□ 2.9
SLC52A1Q9NWF4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
SLC52A1Q9NWF4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SLC52A1Q9NWF4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC33.18■■■□□ 2.9
SLC52A1Q9NWF4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC33.18■■■□□ 2.9
SLC52A1Q9NWF4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SLC52A1Q9NWF4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SLC52A1Q9NWF4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC33.18■■■□□ 2.9
SLC52A1Q9NWF4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SLC52A1Q9NWF4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
SLC52A1Q9NWF4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC33.17■■■□□ 2.9
SLC52A1Q9NWF4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
SLC52A1Q9NWF4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SLC52A1Q9NWF4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
SLC52A1Q9NWF4 GRAMD4P2-201ENST00000423297 1097 ntBASIC33.15■■■□□ 2.9
SLC52A1Q9NWF4 AC034268.1-201ENST00000441047 882 ntBASIC33.15■■■□□ 2.9
SLC52A1Q9NWF4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC33.15■■■□□ 2.9
SLC52A1Q9NWF4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SLC52A1Q9NWF4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
SLC52A1Q9NWF4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC33.14■■■□□ 2.89
SLC52A1Q9NWF4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC33.13■■■□□ 2.89
SLC52A1Q9NWF4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms