Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
GKN1Q9NS71 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
GKN1Q9NS71 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.88■■□□□ 1.41
GKN1Q9NS71 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
GKN1Q9NS71 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.88■■□□□ 1.41
GKN1Q9NS71 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.87■■□□□ 1.41
GKN1Q9NS71 AC135731.1-201ENST00000569415 2548 ntBASIC23.87■■□□□ 1.41
GKN1Q9NS71 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.87■■□□□ 1.41
GKN1Q9NS71 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 AL136162.1-201ENST00000607711 1078 ntBASIC23.87■■□□□ 1.41
GKN1Q9NS71 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.87■■□□□ 1.41
GKN1Q9NS71 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.87■■□□□ 1.41
GKN1Q9NS71 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.87■■□□□ 1.41
GKN1Q9NS71 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GKN1Q9NS71 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
GKN1Q9NS71 AC005703.6-201ENST00000623265 1329 ntBASIC23.86■■□□□ 1.41
GKN1Q9NS71 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
GKN1Q9NS71 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GKN1Q9NS71 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.86■■□□□ 1.41
GKN1Q9NS71 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
GKN1Q9NS71 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.86■■□□□ 1.41
GKN1Q9NS71 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
GKN1Q9NS71 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GKN1Q9NS71 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
GKN1Q9NS71 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.85■■□□□ 1.41
GKN1Q9NS71 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
GKN1Q9NS71 AC142381.2-201ENST00000566120 298 ntBASIC23.85■■□□□ 1.41
GKN1Q9NS71 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.85■■□□□ 1.41
GKN1Q9NS71 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.85■■□□□ 1.41
GKN1Q9NS71 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GKN1Q9NS71 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GKN1Q9NS71 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GKN1Q9NS71 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.84■■□□□ 1.41
GKN1Q9NS71 AC020928.2-201ENST00000588717 2197 ntBASIC23.84■■□□□ 1.41
GKN1Q9NS71 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.83■■□□□ 1.41
GKN1Q9NS71 AC138932.3-201ENST00000567634 1902 ntBASIC23.83■■□□□ 1.41
GKN1Q9NS71 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.83■■□□□ 1.41
GKN1Q9NS71 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.83■■□□□ 1.41
GKN1Q9NS71 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.83■■□□□ 1.41
GKN1Q9NS71 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.83■■□□□ 1.41
GKN1Q9NS71 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GKN1Q9NS71 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
GKN1Q9NS71 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
GKN1Q9NS71 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
GKN1Q9NS71 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
GKN1Q9NS71 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.82■■□□□ 1.4
GKN1Q9NS71 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GKN1Q9NS71 AC135279.3-201ENST00000610945 1311 ntBASIC23.82■■□□□ 1.4
GKN1Q9NS71 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GKN1Q9NS71 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GKN1Q9NS71 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GKN1Q9NS71 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.81■■□□□ 1.4
GKN1Q9NS71 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GKN1Q9NS71 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
GKN1Q9NS71 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GKN1Q9NS71 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.81■■□□□ 1.4
GKN1Q9NS71 AP003733.4-201ENST00000623785 1697 ntBASIC23.8■■□□□ 1.4
GKN1Q9NS71 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
GKN1Q9NS71 ZNRF2P3-201ENST00000424200 374 ntBASIC23.8■■□□□ 1.4
GKN1Q9NS71 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
GKN1Q9NS71 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.8■■□□□ 1.4
GKN1Q9NS71 SUDS3P1-201ENST00000505831 966 ntBASIC23.8■■□□□ 1.4
GKN1Q9NS71 AC024257.2-201ENST00000549699 147 ntBASIC23.8■■□□□ 1.4
GKN1Q9NS71 AL031432.3-201ENST00000607698 485 ntBASIC23.8■■□□□ 1.4
GKN1Q9NS71 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GKN1Q9NS71 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GKN1Q9NS71 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GKN1Q9NS71 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
GKN1Q9NS71 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.79■■□□□ 1.4
GKN1Q9NS71 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.78■■□□□ 1.4
GKN1Q9NS71 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
GKN1Q9NS71 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GKN1Q9NS71 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.78■■□□□ 1.4
GKN1Q9NS71 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GKN1Q9NS71 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
GKN1Q9NS71 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GKN1Q9NS71 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.77■■□□□ 1.4
GKN1Q9NS71 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GKN1Q9NS71 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GKN1Q9NS71 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms