Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 AC026471.1-201ENST00000564629 3026 ntBASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 LETM1P2-201ENST00000597330 2178 ntBASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE1Q9NRR8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 AC100797.4-201ENST00000631653 1827 ntBASIC11.9□□□□□ -0.5
CDC42SE1Q9NRR8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC42SE1Q9NRR8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CDC42SE1Q9NRR8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC42SE1Q9NRR8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
CDC42SE1Q9NRR8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC42SE1Q9NRR8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
CDC42SE1Q9NRR8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 AL020996.1-203ENST00000536896 2307 ntBASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 ECEL1P1-201ENST00000373592 1742 ntBASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE1Q9NRR8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE1Q9NRR8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms