Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 MIR639-201ENST00000384974 98 ntBASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf4Q9NQ89 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.68■□□□□ 0.74
C12orf4Q9NQ89 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 AC022413.1-201ENST00000624602 984 ntBASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf4Q9NQ89 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 KRT18P10-201ENST00000388836 1287 ntBASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 AC007029.1-201ENST00000604183 313 ntBASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 AC004812.2-201ENST00000611079 2094 ntBASIC19.66■□□□□ 0.74
C12orf4Q9NQ89 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf4Q9NQ89 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
C12orf4Q9NQ89 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf4Q9NQ89 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.63■□□□□ 0.73
C12orf4Q9NQ89 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C12orf4Q9NQ89 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 FOXO3B-201ENST00000395675 1928 ntBASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 HLA-L-211ENST00000482052 1765 ntBASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
C12orf4Q9NQ89 C1orf229-201ENST00000623686 2258 ntBASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.6■□□□□ 0.73
C12orf4Q9NQ89 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms