Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMSS1Q9BQ75 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMSS1Q9BQ75 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 C9orf163-202ENST00000624034 2573 ntBASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CMSS1Q9BQ75 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CMSS1Q9BQ75 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CMSS1Q9BQ75 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CMSS1Q9BQ75 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CMSS1Q9BQ75 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMSS1Q9BQ75 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 MIR4449-201ENST00000578365 66 ntBASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 AC090877.2-201ENST00000558441 1738 ntBASIC19.37■□□□□ 0.69
CMSS1Q9BQ75 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 RPS2P7-201ENST00000447334 885 ntBASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMSS1Q9BQ75 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 AC018755.3-202ENST00000596210 929 ntBASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.35■□□□□ 0.69
CMSS1Q9BQ75 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMSS1Q9BQ75 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms