Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC6Q99741 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC6Q99741 C17orf82-201ENST00000623772 1530 ntBASIC22.21■■□□□ 1.15
CDC6Q99741 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CDC6Q99741 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC6Q99741 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.21■■□□□ 1.15
CDC6Q99741 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.21■■□□□ 1.15
CDC6Q99741 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC6Q99741 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC6Q99741 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC6Q99741 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CDC6Q99741 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
CDC6Q99741 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.2■■□□□ 1.15
CDC6Q99741 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.2■■□□□ 1.14
CDC6Q99741 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC6Q99741 AL137784.2-201ENST00000607332 1000 ntBASIC22.2■■□□□ 1.14
CDC6Q99741 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDC6Q99741 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC6Q99741 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC6Q99741 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDC6Q99741 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDC6Q99741 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC6Q99741 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC6Q99741 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDC6Q99741 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC6Q99741 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CDC6Q99741 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC6Q99741 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CDC6Q99741 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC6Q99741 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC6Q99741 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.18■■□□□ 1.14
CDC6Q99741 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
CDC6Q99741 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC6Q99741 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC6Q99741 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.18■■□□□ 1.14
CDC6Q99741 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.18■■□□□ 1.14
CDC6Q99741 AC022517.1-201ENST00000592429 346 ntBASIC22.18■■□□□ 1.14
CDC6Q99741 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.18■■□□□ 1.14
CDC6Q99741 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
CDC6Q99741 AC009086.3-201ENST00000623486 1008 ntBASIC22.18■■□□□ 1.14
CDC6Q99741 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CDC6Q99741 ERN1-208ENST00000606895 2068 ntBASIC22.18■■□□□ 1.14
CDC6Q99741 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC6Q99741 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CDC6Q99741 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC6Q99741 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC6Q99741 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.17■■□□□ 1.14
CDC6Q99741 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CDC6Q99741 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC6Q99741 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC6Q99741 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.17■■□□□ 1.14
CDC6Q99741 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CDC6Q99741 AL022069.1-201ENST00000568025 1636 ntBASIC22.17■■□□□ 1.14
CDC6Q99741 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC6Q99741 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC6Q99741 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC6Q99741 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC6Q99741 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDC6Q99741 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC6Q99741 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC6Q99741 YBX1P1-201ENST00000445822 960 ntBASIC22.16■■□□□ 1.14
CDC6Q99741 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC6Q99741 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC6Q99741 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.16■■□□□ 1.14
CDC6Q99741 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.15■■□□□ 1.14
CDC6Q99741 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC6Q99741 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDC6Q99741 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.15■■□□□ 1.14
CDC6Q99741 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC6Q99741 MIR3181-201ENST00000578512 73 ntBASIC22.15■■□□□ 1.14
CDC6Q99741 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 AC010501.1-201ENST00000606270 1962 ntBASIC22.15■■□□□ 1.14
CDC6Q99741 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC6Q99741 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDC6Q99741 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC6Q99741 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.14■■□□□ 1.13
CDC6Q99741 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDC6Q99741 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDC6Q99741 AC126544.1-201ENST00000580842 1059 ntBASIC22.14■■□□□ 1.13
CDC6Q99741 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CDC6Q99741 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC6Q99741 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC6Q99741 SLC47A1P1-202ENST00000449666 945 ntBASIC22.13■■□□□ 1.13
CDC6Q99741 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC6Q99741 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC6Q99741 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.13■■□□□ 1.13
CDC6Q99741 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.12■■□□□ 1.13
CDC6Q99741 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDC6Q99741 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.12■■□□□ 1.13
CDC6Q99741 AC006455.2-201ENST00000429931 906 ntBASIC22.12■■□□□ 1.13
CDC6Q99741 KRT18P5-201ENST00000436075 1291 ntBASIC22.12■■□□□ 1.13
CDC6Q99741 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms