Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 AL512631.2-201ENST00000604634 923 ntBASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP1Q96SZ6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5RAP1Q96SZ6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5RAP1Q96SZ6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.83■■□□□ 1.4
CDK5RAP1Q96SZ6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 AL136116.3-201ENST00000402907 1138 ntBASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP1Q96SZ6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.81■■□□□ 1.4
CDK5RAP1Q96SZ6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP1Q96SZ6 ALDH1A3-203ENST00000557963 1670 ntBASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 AC141586.4-201ENST00000624558 1573 ntBASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 MIR4466-201ENST00000606121 54 ntBASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5RAP1Q96SZ6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.78■■□□□ 1.4
CDK5RAP1Q96SZ6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK5RAP1Q96SZ6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.78■■□□□ 1.4
CDK5RAP1Q96SZ6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.78■■□□□ 1.4
CDK5RAP1Q96SZ6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.78■■□□□ 1.4
CDK5RAP1Q96SZ6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.77■■□□□ 1.4
CDK5RAP1Q96SZ6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.77■■□□□ 1.4
CDK5RAP1Q96SZ6 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.77■■□□□ 1.4
CDK5RAP1Q96SZ6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5RAP1Q96SZ6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK5RAP1Q96SZ6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5RAP1Q96SZ6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP1Q96SZ6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP1Q96SZ6 SRD5A1P1-201ENST00000442297 786 ntBASIC23.75■■□□□ 1.39
CDK5RAP1Q96SZ6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5RAP1Q96SZ6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDK5RAP1Q96SZ6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK5RAP1Q96SZ6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms