Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S3Q96PC3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 HLA-V-202ENST00000446817 847 ntBASIC17.16■□□□□ 0.34
AP1S3Q96PC3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S3Q96PC3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S3Q96PC3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP1S3Q96PC3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
AP1S3Q96PC3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.14■□□□□ 0.33
AP1S3Q96PC3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S3Q96PC3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S3Q96PC3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms