Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP3BQ96NU0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CNTNAP3BQ96NU0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP3BQ96NU0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP3BQ96NU0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
CNTNAP3BQ96NU0 AC008687.6-201ENST00000596318 630 ntBASIC21.97■■□□□ 1.11
CNTNAP3BQ96NU0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.97■■□□□ 1.11
CNTNAP3BQ96NU0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 NCF1B-203ENST00000435988 1254 ntBASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 CROCCP5-201ENST00000436658 830 ntBASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 AC126544.1-201ENST00000580842 1059 ntBASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 TSPY26P-201ENST00000476365 1326 ntBASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.96■■□□□ 1.11
CNTNAP3BQ96NU0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 FAM201B-201ENST00000458407 597 ntBASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 KRT18P6-201ENST00000555540 1265 ntBASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 MIR4651-201ENST00000582622 73 ntBASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 AC087239.1-201ENST00000622671 572 ntBASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3BQ96NU0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 AC016769.1-201ENST00000409132 1010 ntBASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3BQ96NU0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP3BQ96NU0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP3BQ96NU0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.93■■□□□ 1.1
CNTNAP3BQ96NU0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.93■■□□□ 1.1
CNTNAP3BQ96NU0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.93■■□□□ 1.1
CNTNAP3BQ96NU0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP3BQ96NU0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP3BQ96NU0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.92■■□□□ 1.1
CNTNAP3BQ96NU0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.92■■□□□ 1.1
CNTNAP3BQ96NU0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP3BQ96NU0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 TERF1P2-201ENST00000583350 1212 ntBASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CNTNAP3BQ96NU0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP3BQ96NU0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP3BQ96NU0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP3BQ96NU0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CNTNAP3BQ96NU0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.89■■□□□ 1.09
CNTNAP3BQ96NU0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP3BQ96NU0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CNTNAP3BQ96NU0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP3BQ96NU0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms