Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
APH1BQ8WW43 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.76■□□□□ 0.91
APH1BQ8WW43 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1BQ8WW43 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1BQ8WW43 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
APH1BQ8WW43 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1BQ8WW43 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1BQ8WW43 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APH1BQ8WW43 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.76■□□□□ 0.91
APH1BQ8WW43 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.75■□□□□ 0.91
APH1BQ8WW43 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
APH1BQ8WW43 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.75■□□□□ 0.91
APH1BQ8WW43 AC060814.1-201ENST00000554326 538 ntBASIC20.75■□□□□ 0.91
APH1BQ8WW43 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
APH1BQ8WW43 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.75■□□□□ 0.91
APH1BQ8WW43 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 AC007375.3-201ENST00000600936 2314 ntBASIC20.75■□□□□ 0.91
APH1BQ8WW43 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1BQ8WW43 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1BQ8WW43 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1BQ8WW43 ZNRF2P2-203ENST00000454624 420 ntBASIC20.74■□□□□ 0.91
APH1BQ8WW43 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APH1BQ8WW43 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1BQ8WW43 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1BQ8WW43 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1BQ8WW43 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.73■□□□□ 0.91
APH1BQ8WW43 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.73■□□□□ 0.91
APH1BQ8WW43 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1BQ8WW43 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
APH1BQ8WW43 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
APH1BQ8WW43 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.72■□□□□ 0.91
APH1BQ8WW43 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.72■□□□□ 0.91
APH1BQ8WW43 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.72■□□□□ 0.91
APH1BQ8WW43 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1BQ8WW43 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.71■□□□□ 0.91
APH1BQ8WW43 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
APH1BQ8WW43 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APH1BQ8WW43 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.71■□□□□ 0.91
APH1BQ8WW43 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APH1BQ8WW43 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
APH1BQ8WW43 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
APH1BQ8WW43 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.7■□□□□ 0.9
APH1BQ8WW43 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1BQ8WW43 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1BQ8WW43 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.7■□□□□ 0.9
APH1BQ8WW43 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1BQ8WW43 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1BQ8WW43 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APH1BQ8WW43 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1BQ8WW43 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
APH1BQ8WW43 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1BQ8WW43 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
APH1BQ8WW43 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.68■□□□□ 0.9
APH1BQ8WW43 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
APH1BQ8WW43 RPS2P35-201ENST00000443417 897 ntBASIC20.68■□□□□ 0.9
APH1BQ8WW43 RP9P-202ENST00000450133 1212 ntBASIC20.68■□□□□ 0.9
APH1BQ8WW43 AC092296.2-201ENST00000589470 999 ntBASIC20.68■□□□□ 0.9
APH1BQ8WW43 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APH1BQ8WW43 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APH1BQ8WW43 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
APH1BQ8WW43 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APH1BQ8WW43 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APH1BQ8WW43 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.68■□□□□ 0.9
APH1BQ8WW43 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1BQ8WW43 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1BQ8WW43 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1BQ8WW43 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
APH1BQ8WW43 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms