Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TMC1Q8TDI8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.9■■■□□ 2.7
TMC1Q8TDI8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 MIR638-201ENST00000385237 100 ntBASIC31.89■■■□□ 2.7
TMC1Q8TDI8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 AC096631.2-201ENST00000436136 790 ntBASIC31.89■■■□□ 2.7
TMC1Q8TDI8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TMC1Q8TDI8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.69
TMC1Q8TDI8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TMC1Q8TDI8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TMC1Q8TDI8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TMC1Q8TDI8 AC110285.6-201ENST00000617652 491 ntBASIC31.87■■■□□ 2.69
TMC1Q8TDI8 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.87■■■□□ 2.69
TMC1Q8TDI8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
TMC1Q8TDI8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TMC1Q8TDI8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.86■■■□□ 2.69
TMC1Q8TDI8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.86■■■□□ 2.69
TMC1Q8TDI8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.86■■■□□ 2.69
TMC1Q8TDI8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.86■■■□□ 2.69
TMC1Q8TDI8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TMC1Q8TDI8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.86■■■□□ 2.69
TMC1Q8TDI8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TMC1Q8TDI8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TMC1Q8TDI8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TMC1Q8TDI8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.85■■■□□ 2.69
TMC1Q8TDI8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.85■■■□□ 2.69
TMC1Q8TDI8 AP003733.4-201ENST00000623785 1697 ntBASIC31.85■■■□□ 2.69
TMC1Q8TDI8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TMC1Q8TDI8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TMC1Q8TDI8 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 AC005703.6-201ENST00000623265 1329 ntBASIC31.83■■■□□ 2.69
TMC1Q8TDI8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
TMC1Q8TDI8 AL139125.2-201ENST00000623134 1869 ntBASIC31.82■■■□□ 2.69
TMC1Q8TDI8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TMC1Q8TDI8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.82■■■□□ 2.68
TMC1Q8TDI8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.82■■■□□ 2.68
TMC1Q8TDI8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TMC1Q8TDI8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TMC1Q8TDI8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
TMC1Q8TDI8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TMC1Q8TDI8 AL022069.1-201ENST00000568025 1636 ntBASIC31.8■■■□□ 2.68
TMC1Q8TDI8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.8■■■□□ 2.68
TMC1Q8TDI8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TMC1Q8TDI8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TMC1Q8TDI8 HLA-L-211ENST00000482052 1765 ntBASIC31.79■■■□□ 2.68
TMC1Q8TDI8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TMC1Q8TDI8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.79■■■□□ 2.68
TMC1Q8TDI8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.79■■■□□ 2.68
TMC1Q8TDI8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.79■■■□□ 2.68
TMC1Q8TDI8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TMC1Q8TDI8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMC1Q8TDI8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.77■■■□□ 2.68
TMC1Q8TDI8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
TMC1Q8TDI8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.76■■■□□ 2.67
TMC1Q8TDI8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.76■■■□□ 2.67
TMC1Q8TDI8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TMC1Q8TDI8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TMC1Q8TDI8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms