Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF555Q8NEP9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF555Q8NEP9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF555Q8NEP9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF555Q8NEP9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF555Q8NEP9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF555Q8NEP9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ZNF555Q8NEP9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 ECEL1P1-201ENST00000373592 1742 ntBASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF555Q8NEP9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF555Q8NEP9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF555Q8NEP9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.11■□□□□ 0.97
ZNF555Q8NEP9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF555Q8NEP9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms