Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC4A11Q8NBS3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC4A11Q8NBS3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SLC4A11Q8NBS3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SLC4A11Q8NBS3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SLC4A11Q8NBS3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC4A11Q8NBS3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 MIR6722-201ENST00000617286 78 ntBASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 ABCB10P4-201ENST00000566803 2184 ntBASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SLC4A11Q8NBS3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC4A11Q8NBS3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 MTDHP2-201ENST00000601468 714 ntBASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 ALDH1A3-203ENST00000557963 1670 ntBASIC24.34■■□□□ 1.49
SLC4A11Q8NBS3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 AC010997.5-201ENST00000609182 354 ntBASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC4A11Q8NBS3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SLC4A11Q8NBS3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC4A11Q8NBS3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC4A11Q8NBS3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC4A11Q8NBS3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC4A11Q8NBS3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
SLC4A11Q8NBS3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC4A11Q8NBS3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC4A11Q8NBS3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC4A11Q8NBS3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC4A11Q8NBS3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC4A11Q8NBS3 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.28■■□□□ 1.48
SLC4A11Q8NBS3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC4A11Q8NBS3 KRT16P3-201ENST00000439127 1283 ntBASIC24.28■■□□□ 1.48
SLC4A11Q8NBS3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms