Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 WHAMMP2-203ENST00000563942 1603 ntBASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM20Q8N5G0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 AC138932.3-201ENST00000567634 1902 ntBASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM20Q8N5G0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM20Q8N5G0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM20Q8N5G0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM20Q8N5G0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM20Q8N5G0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM20Q8N5G0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms