Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF561Q8N587 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF561Q8N587 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ZNF561Q8N587 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF561Q8N587 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF561Q8N587 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF561Q8N587 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF561Q8N587 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF561Q8N587 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF561Q8N587 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF561Q8N587 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF561Q8N587 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF561Q8N587 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF561Q8N587 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF561Q8N587 AC103724.3-201ENST00000564481 992 ntBASIC19.36■□□□□ 0.69
ZNF561Q8N587 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ZNF561Q8N587 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ZNF561Q8N587 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ZNF561Q8N587 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ZNF561Q8N587 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ZNF561Q8N587 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF561Q8N587 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF561Q8N587 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF561Q8N587 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF561Q8N587 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF561Q8N587 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF561Q8N587 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF561Q8N587 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF561Q8N587 MIR4281-201ENST00000580852 62 ntBASIC19.34■□□□□ 0.69
ZNF561Q8N587 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF561Q8N587 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF561Q8N587 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF561Q8N587 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF561Q8N587 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF561Q8N587 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF561Q8N587 AL031848.2-201ENST00000607670 837 ntBASIC19.33■□□□□ 0.68
ZNF561Q8N587 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF561Q8N587 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF561Q8N587 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ZNF561Q8N587 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF561Q8N587 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF561Q8N587 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF561Q8N587 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZNF561Q8N587 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ZNF561Q8N587 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF561Q8N587 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF561Q8N587 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF561Q8N587 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF561Q8N587 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF561Q8N587 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
ZNF561Q8N587 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF561Q8N587 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF561Q8N587 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ZNF561Q8N587 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF561Q8N587 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF561Q8N587 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF561Q8N587 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF561Q8N587 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF561Q8N587 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF561Q8N587 AL161729.1-201ENST00000604104 1402 ntBASIC19.31■□□□□ 0.68
ZNF561Q8N587 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF561Q8N587 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF561Q8N587 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF561Q8N587 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF561Q8N587 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF561Q8N587 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF561Q8N587 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF561Q8N587 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF561Q8N587 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF561Q8N587 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF561Q8N587 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF561Q8N587 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF561Q8N587 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF561Q8N587 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF561Q8N587 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF561Q8N587 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF561Q8N587 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF561Q8N587 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF561Q8N587 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF561Q8N587 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF561Q8N587 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF561Q8N587 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms