Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM42Q8IWZ5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM42Q8IWZ5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.73■■□□□ 1.23
TRIM42Q8IWZ5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM42Q8IWZ5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM42Q8IWZ5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TRIM42Q8IWZ5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.7■■□□□ 1.23
TRIM42Q8IWZ5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM42Q8IWZ5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM42Q8IWZ5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 GPX1-201ENST00000419349 1106 ntBASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 AC092296.2-201ENST00000589470 999 ntBASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 AC022413.1-201ENST00000624602 984 ntBASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM42Q8IWZ5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 AL161729.1-201ENST00000604104 1402 ntBASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 AC093536.1-201ENST00000569153 554 ntBASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TRIM42Q8IWZ5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 ECEL1P2-201ENST00000461596 1295 ntBASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM42Q8IWZ5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 PKD1P6-201ENST00000343738 4769 ntBASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM42Q8IWZ5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM42Q8IWZ5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TRIM42Q8IWZ5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
TRIM42Q8IWZ5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.64■■□□□ 1.22
TRIM42Q8IWZ5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TRIM42Q8IWZ5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM42Q8IWZ5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.64■■□□□ 1.21
TRIM42Q8IWZ5 EP400NL-214ENST00000641289 2402 ntBASIC22.64■■□□□ 1.21
TRIM42Q8IWZ5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM42Q8IWZ5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM42Q8IWZ5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TRIM42Q8IWZ5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms