Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD2Q8IV50 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.08■□□□□ 0.81
LYSMD2Q8IV50 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD2Q8IV50 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 AC092667.1-201ENST00000434301 2586 ntBASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD2Q8IV50 AC242852.2-201ENST00000615738 1807 ntBASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 HLA-L-211ENST00000482052 1765 ntBASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 AC044849.2-201ENST00000606596 710 ntBASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD2Q8IV50 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 AC092068.2-201ENST00000590491 1708 ntBASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYSMD2Q8IV50 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 MIR219A2-201ENST00000608502 1504 ntBASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYSMD2Q8IV50 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 DUX4L29-201ENST00000425409 679 ntBASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 RNF165-205ENST00000588679 2904 ntBASIC20.03■□□□□ 0.8
LYSMD2Q8IV50 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.02■□□□□ 0.8
LYSMD2Q8IV50 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
LYSMD2Q8IV50 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 AL359258.2-201ENST00000564063 1566 ntBASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD2Q8IV50 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms