Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 MIR6089-201ENST00000616698 64 ntBASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAD3Q86YD5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAD3Q86YD5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.4■□□□□ 0.7
LDLRAD3Q86YD5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAD3Q86YD5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAD3Q86YD5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.39■□□□□ 0.7
LDLRAD3Q86YD5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 LONRF2P2-201ENST00000439212 571 ntBASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.39■□□□□ 0.69
LDLRAD3Q86YD5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 DUSP8P5-201ENST00000422884 1815 ntBASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAD3Q86YD5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 AC009299.2-201ENST00000482477 511 ntBASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAD3Q86YD5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 AC103724.3-201ENST00000564481 992 ntBASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LDLRAD3Q86YD5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 AL031848.2-201ENST00000607670 837 ntBASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDLRAD3Q86YD5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.34■□□□□ 0.69
LDLRAD3Q86YD5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDLRAD3Q86YD5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LDLRAD3Q86YD5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAD3Q86YD5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAD3Q86YD5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LDLRAD3Q86YD5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.33■□□□□ 0.68
LDLRAD3Q86YD5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.33■□□□□ 0.68
LDLRAD3Q86YD5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 ABCB10P4-201ENST00000566803 2184 ntBASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 AC022616.5-201ENST00000518796 181 ntBASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAD3Q86YD5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
LDLRAD3Q86YD5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms