Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC28Q86X40 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC28Q86X40 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC28Q86X40 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC28Q86X40 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC28Q86X40 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC28Q86X40 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC28Q86X40 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LRRC28Q86X40 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRRC28Q86X40 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC28Q86X40 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC28Q86X40 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC28Q86X40 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRRC28Q86X40 EP400NL-214ENST00000641289 2402 ntBASIC20.24■□□□□ 0.83
LRRC28Q86X40 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC28Q86X40 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC28Q86X40 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC28Q86X40 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC28Q86X40 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC28Q86X40 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC28Q86X40 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC28Q86X40 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
LRRC28Q86X40 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC28Q86X40 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC28Q86X40 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC28Q86X40 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC28Q86X40 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC28Q86X40 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRRC28Q86X40 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC28Q86X40 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC28Q86X40 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC28Q86X40 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC28Q86X40 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC28Q86X40 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC28Q86X40 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LRRC28Q86X40 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC28Q86X40 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC28Q86X40 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC28Q86X40 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC28Q86X40 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC28Q86X40 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRC28Q86X40 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC28Q86X40 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC28Q86X40 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC28Q86X40 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRRC28Q86X40 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC28Q86X40 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC28Q86X40 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRRC28Q86X40 AC074183.2-201ENST00000623112 922 ntBASIC20.2■□□□□ 0.82
LRRC28Q86X40 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC28Q86X40 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
LRRC28Q86X40 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRRC28Q86X40 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC28Q86X40 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LRRC28Q86X40 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
LRRC28Q86X40 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC28Q86X40 KRT18P10-201ENST00000388836 1287 ntBASIC20.19■□□□□ 0.82
LRRC28Q86X40 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC28Q86X40 BHLHE23-202ENST00000612929 1109 ntBASIC20.19■□□□□ 0.82
LRRC28Q86X40 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC28Q86X40 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC28Q86X40 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC28Q86X40 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC28Q86X40 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRC28Q86X40 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC28Q86X40 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC28Q86X40 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LRRC28Q86X40 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
LRRC28Q86X40 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC28Q86X40 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LRRC28Q86X40 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC28Q86X40 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC28Q86X40 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.17■□□□□ 0.82
LRRC28Q86X40 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC28Q86X40 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRRC28Q86X40 AC139795.1-202ENST00000500444 432 ntBASIC20.17■□□□□ 0.82
LRRC28Q86X40 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms