Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF550Q7Z398 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
ZNF550Q7Z398 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF550Q7Z398 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF550Q7Z398 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF550Q7Z398 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 LBH-205ENST00000407930 756 ntTSL 2 BASIC21■□□□□ 0.95
ZNF550Q7Z398 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 MIR4281-201ENST00000580852 62 ntBASIC21■□□□□ 0.95
ZNF550Q7Z398 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21■□□□□ 0.95
ZNF550Q7Z398 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21■□□□□ 0.95
ZNF550Q7Z398 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF550Q7Z398 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF550Q7Z398 AC131274.2-201ENST00000580697 1507 ntBASIC20.99■□□□□ 0.95
ZNF550Q7Z398 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF550Q7Z398 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZNF550Q7Z398 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.98■□□□□ 0.95
ZNF550Q7Z398 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF550Q7Z398 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF550Q7Z398 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF550Q7Z398 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZNF550Q7Z398 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.96■□□□□ 0.95
ZNF550Q7Z398 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF550Q7Z398 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF550Q7Z398 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF550Q7Z398 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF550Q7Z398 AF131216.4-201ENST00000638924 1588 ntBASIC20.94■□□□□ 0.94
ZNF550Q7Z398 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF550Q7Z398 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF550Q7Z398 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZNF550Q7Z398 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZNF550Q7Z398 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF550Q7Z398 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms