Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
FOXR2Q6PJQ5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
FOXR2Q6PJQ5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.08■■□□□ 1.6
FOXR2Q6PJQ5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
FOXR2Q6PJQ5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 ANOS2P-203ENST00000472227 1816 ntBASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
FOXR2Q6PJQ5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 AC068473.5-201ENST00000616428 2072 ntBASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.06■■□□□ 1.6
FOXR2Q6PJQ5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 AC004448.1-201ENST00000458332 883 ntBASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FOXR2Q6PJQ5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FOXR2Q6PJQ5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 AC103834.1-201ENST00000520383 144 ntBASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.03■■□□□ 1.6
FOXR2Q6PJQ5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 DUSP8P3-201ENST00000399571 1760 ntBASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR2Q6PJQ5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR2Q6PJQ5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
FOXR2Q6PJQ5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR2Q6PJQ5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR2Q6PJQ5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.99■■□□□ 1.59
FOXR2Q6PJQ5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXR2Q6PJQ5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.99■■□□□ 1.59
FOXR2Q6PJQ5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
FOXR2Q6PJQ5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.98■■□□□ 1.59
FOXR2Q6PJQ5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
FOXR2Q6PJQ5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FOXR2Q6PJQ5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.98■■□□□ 1.59
FOXR2Q6PJQ5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.98■■□□□ 1.59
FOXR2Q6PJQ5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms