Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 MIR3960-201ENST00000583311 91 ntBASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 RAP2CP1-202ENST00000605179 643 ntBASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 MIR6765-201ENST00000614092 87 ntBASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.7■■□□□ 1.38
FOXR1Q6PIV2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 YBX1P4-201ENST00000392794 808 ntBASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
FOXR1Q6PIV2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 AC018755.3-202ENST00000596210 929 ntBASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.68■■□□□ 1.38
FOXR1Q6PIV2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 AL137060.1-201ENST00000618151 2648 ntBASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FOXR1Q6PIV2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 AC074183.2-201ENST00000623112 922 ntBASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.66■■□□□ 1.38
FOXR1Q6PIV2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXR1Q6PIV2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.65■■□□□ 1.38
FOXR1Q6PIV2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
FOXR1Q6PIV2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXR1Q6PIV2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXR1Q6PIV2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.65■■□□□ 1.38
FOXR1Q6PIV2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXR1Q6PIV2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
FOXR1Q6PIV2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXR1Q6PIV2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXR1Q6PIV2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXR1Q6PIV2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 AC009299.2-201ENST00000482477 511 ntBASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FOXR1Q6PIV2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 SLC6A10P-202ENST00000431994 2058 ntBASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXR1Q6PIV2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms