Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 BX842568.3-201ENST00000418104 571 ntBASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 AC006455.2-201ENST00000429931 906 ntBASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CNKSR3Q6P9H4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CNKSR3Q6P9H4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.93■■□□□ 1.58
CNKSR3Q6P9H4 AC092803.2-201ENST00000564287 1899 ntBASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 MIR6089-201ENST00000616698 64 ntBASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 AC009086.3-201ENST00000623486 1008 ntBASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
CNKSR3Q6P9H4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 MIR3181-201ENST00000578512 73 ntBASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CNKSR3Q6P9H4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.9■■□□□ 1.58
CNKSR3Q6P9H4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CNKSR3Q6P9H4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CNKSR3Q6P9H4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CNKSR3Q6P9H4 SLC6A10P-202ENST00000431994 2058 ntBASIC24.89■■□□□ 1.58
CNKSR3Q6P9H4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.89■■□□□ 1.58
CNKSR3Q6P9H4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
CNKSR3Q6P9H4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.88■■□□□ 1.57
CNKSR3Q6P9H4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.88■■□□□ 1.57
CNKSR3Q6P9H4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.88■■□□□ 1.57
CNKSR3Q6P9H4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 AC034268.1-201ENST00000441047 882 ntBASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.87■■□□□ 1.57
CNKSR3Q6P9H4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CNKSR3Q6P9H4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CNKSR3Q6P9H4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CNKSR3Q6P9H4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms