Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 AP001330.3-201ENST00000520123 633 ntBASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 MIR4767-201ENST00000582827 78 ntBASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
KRTCAP3Q53RY4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRTCAP3Q53RY4 AC026271.2-201ENST00000428091 497 ntBASIC20.58■□□□□ 0.89
KRTCAP3Q53RY4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.58■□□□□ 0.89
KRTCAP3Q53RY4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRTCAP3Q53RY4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.58■□□□□ 0.89
KRTCAP3Q53RY4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRTCAP3Q53RY4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRTCAP3Q53RY4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KRTCAP3Q53RY4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KRTCAP3Q53RY4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.57■□□□□ 0.88
KRTCAP3Q53RY4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.57■□□□□ 0.88
KRTCAP3Q53RY4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.57■□□□□ 0.88
KRTCAP3Q53RY4 MIR5787-201ENST00000611784 55 ntBASIC20.57■□□□□ 0.88
KRTCAP3Q53RY4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRTCAP3Q53RY4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 C17orf82-201ENST00000623772 1530 ntBASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRTCAP3Q53RY4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRTCAP3Q53RY4 AC145676.1-201ENST00000514988 2004 ntBASIC20.55■□□□□ 0.88
KRTCAP3Q53RY4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRTCAP3Q53RY4 AC027682.1-201ENST00000562846 899 ntBASIC20.55■□□□□ 0.88
KRTCAP3Q53RY4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRTCAP3Q53RY4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRTCAP3Q53RY4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 CA15P2-201ENST00000611168 834 ntBASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRTCAP3Q53RY4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRTCAP3Q53RY4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRTCAP3Q53RY4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 AC092666.2-201ENST00000613287 246 ntBASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
KRTCAP3Q53RY4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 AC136469.2-201ENST00000623944 1028 ntBASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRTCAP3Q53RY4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 AC091060.1-201ENST00000623524 1766 ntBASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRTCAP3Q53RY4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms