Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDCD4Q53EL6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDCD4Q53EL6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
PDCD4Q53EL6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.95■■□□□ 1.11
PDCD4Q53EL6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 AC087393.1-201ENST00000582896 145 ntBASIC21.95■■□□□ 1.1
PDCD4Q53EL6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDCD4Q53EL6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 SPCS2P3-201ENST00000500401 656 ntBASIC21.94■■□□□ 1.1
PDCD4Q53EL6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 DUSP8P3-201ENST00000399571 1760 ntBASIC21.94■■□□□ 1.1
PDCD4Q53EL6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PDCD4Q53EL6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 AL592293.1-201ENST00000502889 1188 ntBASIC21.93■■□□□ 1.1
PDCD4Q53EL6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDCD4Q53EL6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 RNF126P1-201ENST00000567452 1320 ntBASIC21.92■■□□□ 1.1
PDCD4Q53EL6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDCD4Q53EL6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDCD4Q53EL6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDCD4Q53EL6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDCD4Q53EL6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDCD4Q53EL6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.89■■□□□ 1.1
PDCD4Q53EL6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PDCD4Q53EL6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDCD4Q53EL6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDCD4Q53EL6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDCD4Q53EL6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDCD4Q53EL6 AL117328.2-201ENST00000624617 1940 ntBASIC21.89■■□□□ 1.09
PDCD4Q53EL6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDCD4Q53EL6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDCD4Q53EL6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDCD4Q53EL6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDCD4Q53EL6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms