Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D28Q2M2D7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D28Q2M2D7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D28Q2M2D7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TBC1D28Q2M2D7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D28Q2M2D7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D28Q2M2D7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.87■□□□□ 0.77
TBC1D28Q2M2D7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TBC1D28Q2M2D7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 MIR6722-201ENST00000617286 78 ntBASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TBC1D28Q2M2D7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 AC010997.5-201ENST00000609182 354 ntBASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D28Q2M2D7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TBC1D28Q2M2D7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 KRT16P3-201ENST00000439127 1283 ntBASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 UNC93B8-201ENST00000511903 705 ntBASIC19.83■□□□□ 0.77
TBC1D28Q2M2D7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
TBC1D28Q2M2D7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D28Q2M2D7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D28Q2M2D7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.83■□□□□ 0.76
TBC1D28Q2M2D7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 ALDH1A3-203ENST00000557963 1670 ntBASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D28Q2M2D7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 AC004812.2-201ENST00000611079 2094 ntBASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D28Q2M2D7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.8■□□□□ 0.76
TBC1D28Q2M2D7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.8■□□□□ 0.76
TBC1D28Q2M2D7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.8■□□□□ 0.76
TBC1D28Q2M2D7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms