Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KRT18P14-201ENST00000534205 1250 ntBASIC22.47■■□□□ 1.19
RSPO4Q2I0M5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.47■■□□□ 1.19
RSPO4Q2I0M5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RSPO4Q2I0M5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO4Q2I0M5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 RAP2CP1-201ENST00000605103 478 ntBASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RSPO4Q2I0M5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 CDCA4P2-201ENST00000441182 718 ntBASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 AC241377.3-202ENST00000626088 1088 ntBASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 AC241585.3-202ENST00000628937 1088 ntBASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO4Q2I0M5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 AC142472.1-201ENST00000612013 1741 ntBASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RSPO4Q2I0M5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.42■■□□□ 1.18
RSPO4Q2I0M5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.42■■□□□ 1.18
RSPO4Q2I0M5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.42■■□□□ 1.18
RSPO4Q2I0M5 AC073111.5-205ENST00000641717 521 ntBASIC22.42■■□□□ 1.18
RSPO4Q2I0M5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 AC006455.2-201ENST00000429931 906 ntBASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 CD99P1-205ENST00000527459 561 ntBASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 AL109923.1-201ENST00000618799 583 ntBASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RSPO4Q2I0M5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 AC009102.2-201ENST00000606772 1639 ntBASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 TSPY20P-201ENST00000450910 630 ntBASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 AC012414.1-201ENST00000556676 535 ntBASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 MIR3181-201ENST00000578512 73 ntBASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 DRD5P2-201ENST00000421395 2012 ntBASIC22.4■■□□□ 1.18
RSPO4Q2I0M5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO4Q2I0M5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 TERF1P2-201ENST00000583350 1212 ntBASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 AL354811.1-201ENST00000610286 706 ntBASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO4Q2I0M5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RSPO4Q2I0M5 AC026185.1-201ENST00000445748 174 ntBASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms