Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFNB3Q15768 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.55■□□□□ 0.72
EFNB3Q15768 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
EFNB3Q15768 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.55■□□□□ 0.72
EFNB3Q15768 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EFNB3Q15768 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.55■□□□□ 0.72
EFNB3Q15768 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EFNB3Q15768 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFNB3Q15768 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.54■□□□□ 0.72
EFNB3Q15768 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.54■□□□□ 0.72
EFNB3Q15768 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.54■□□□□ 0.72
EFNB3Q15768 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.54■□□□□ 0.72
EFNB3Q15768 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFNB3Q15768 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFNB3Q15768 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EFNB3Q15768 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFNB3Q15768 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EFNB3Q15768 SRD5A1P1-201ENST00000442297 786 ntBASIC19.53■□□□□ 0.72
EFNB3Q15768 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.53■□□□□ 0.72
EFNB3Q15768 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EFNB3Q15768 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFNB3Q15768 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EFNB3Q15768 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 AC019069.1-201ENST00000610008 1333 ntBASIC19.52■□□□□ 0.72
EFNB3Q15768 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.52■□□□□ 0.72
EFNB3Q15768 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.52■□□□□ 0.72
EFNB3Q15768 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.52■□□□□ 0.72
EFNB3Q15768 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.52■□□□□ 0.72
EFNB3Q15768 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
EFNB3Q15768 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.52■□□□□ 0.72
EFNB3Q15768 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFNB3Q15768 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
EFNB3Q15768 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EFNB3Q15768 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.51■□□□□ 0.71
EFNB3Q15768 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
EFNB3Q15768 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
EFNB3Q15768 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.51■□□□□ 0.71
EFNB3Q15768 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.51■□□□□ 0.71
EFNB3Q15768 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.51■□□□□ 0.71
EFNB3Q15768 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.51■□□□□ 0.71
EFNB3Q15768 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 AC142381.3-201ENST00000568208 1670 ntBASIC19.51■□□□□ 0.71
EFNB3Q15768 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.51■□□□□ 0.71
EFNB3Q15768 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EFNB3Q15768 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.51■□□□□ 0.71
EFNB3Q15768 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
EFNB3Q15768 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EFNB3Q15768 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EFNB3Q15768 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.5■□□□□ 0.71
EFNB3Q15768 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EFNB3Q15768 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EFNB3Q15768 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
EFNB3Q15768 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.5■□□□□ 0.71
EFNB3Q15768 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
EFNB3Q15768 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EFNB3Q15768 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EFNB3Q15768 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EFNB3Q15768 MIR638-201ENST00000385237 100 ntBASIC19.49■□□□□ 0.71
EFNB3Q15768 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EFNB3Q15768 AC096631.2-201ENST00000436136 790 ntBASIC19.49■□□□□ 0.71
EFNB3Q15768 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.49■□□□□ 0.71
EFNB3Q15768 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.49■□□□□ 0.71
EFNB3Q15768 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.49■□□□□ 0.71
EFNB3Q15768 AC110285.6-201ENST00000617652 491 ntBASIC19.49■□□□□ 0.71
EFNB3Q15768 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EFNB3Q15768 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EFNB3Q15768 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EFNB3Q15768 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EFNB3Q15768 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EFNB3Q15768 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EFNB3Q15768 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms