Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL10A1Q03692 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL10A1Q03692 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL10A1Q03692 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.24■□□□□ 0.67
COL10A1Q03692 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL10A1Q03692 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL10A1Q03692 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL10A1Q03692 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL10A1Q03692 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.23■□□□□ 0.67
COL10A1Q03692 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL10A1Q03692 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.23■□□□□ 0.67
COL10A1Q03692 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.23■□□□□ 0.67
COL10A1Q03692 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.23■□□□□ 0.67
COL10A1Q03692 AC131274.2-201ENST00000580697 1507 ntBASIC19.23■□□□□ 0.67
COL10A1Q03692 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL10A1Q03692 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL10A1Q03692 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.22■□□□□ 0.67
COL10A1Q03692 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL10A1Q03692 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL10A1Q03692 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.22■□□□□ 0.67
COL10A1Q03692 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.22■□□□□ 0.67
COL10A1Q03692 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL10A1Q03692 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL10A1Q03692 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.22■□□□□ 0.67
COL10A1Q03692 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.21■□□□□ 0.67
COL10A1Q03692 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL10A1Q03692 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
COL10A1Q03692 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL10A1Q03692 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.2■□□□□ 0.66
COL10A1Q03692 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.2■□□□□ 0.66
COL10A1Q03692 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.2■□□□□ 0.66
COL10A1Q03692 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL10A1Q03692 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.19■□□□□ 0.66
COL10A1Q03692 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.19■□□□□ 0.66
COL10A1Q03692 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.19■□□□□ 0.66
COL10A1Q03692 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL10A1Q03692 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 RARRES2P1-201ENST00000474487 481 ntBASIC19.18■□□□□ 0.66
COL10A1Q03692 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COL10A1Q03692 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL10A1Q03692 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.18■□□□□ 0.66
COL10A1Q03692 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
COL10A1Q03692 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL10A1Q03692 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.18■□□□□ 0.66
COL10A1Q03692 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.17■□□□□ 0.66
COL10A1Q03692 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL10A1Q03692 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL10A1Q03692 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL10A1Q03692 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL10A1Q03692 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL10A1Q03692 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
COL10A1Q03692 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.16■□□□□ 0.66
COL10A1Q03692 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.16■□□□□ 0.66
COL10A1Q03692 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL10A1Q03692 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL10A1Q03692 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.16■□□□□ 0.66
COL10A1Q03692 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL10A1Q03692 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL10A1Q03692 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL10A1Q03692 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL10A1Q03692 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.15■□□□□ 0.66
COL10A1Q03692 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
COL10A1Q03692 AC137630.3-201ENST00000607245 391 ntBASIC19.15■□□□□ 0.66
COL10A1Q03692 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms