Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.93■□□□□ 0.46
CFHR3Q02985 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.93■□□□□ 0.46
CFHR3Q02985 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.93■□□□□ 0.46
CFHR3Q02985 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.93■□□□□ 0.46
CFHR3Q02985 MIR3621-201ENST00000580529 85 ntBASIC17.93■□□□□ 0.46
CFHR3Q02985 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CFHR3Q02985 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CFHR3Q02985 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CFHR3Q02985 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.92■□□□□ 0.46
CFHR3Q02985 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.92■□□□□ 0.46
CFHR3Q02985 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.92■□□□□ 0.46
CFHR3Q02985 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.91■□□□□ 0.46
CFHR3Q02985 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.91■□□□□ 0.46
CFHR3Q02985 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.91■□□□□ 0.46
CFHR3Q02985 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CFHR3Q02985 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.91■□□□□ 0.46
CFHR3Q02985 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.91■□□□□ 0.46
CFHR3Q02985 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.91■□□□□ 0.46
CFHR3Q02985 AC141586.4-201ENST00000624558 1573 ntBASIC17.91■□□□□ 0.46
CFHR3Q02985 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFHR3Q02985 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFHR3Q02985 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFHR3Q02985 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFHR3Q02985 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CFHR3Q02985 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CFHR3Q02985 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CFHR3Q02985 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFHR3Q02985 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.9■□□□□ 0.46
CFHR3Q02985 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.9■□□□□ 0.46
CFHR3Q02985 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CFHR3Q02985 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFHR3Q02985 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CFHR3Q02985 LINC00543-201ENST00000567234 1845 ntBASIC17.89■□□□□ 0.45
CFHR3Q02985 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFHR3Q02985 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.89■□□□□ 0.45
CFHR3Q02985 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.89■□□□□ 0.45
CFHR3Q02985 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.89■□□□□ 0.45
CFHR3Q02985 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFHR3Q02985 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFHR3Q02985 AC005703.6-201ENST00000623265 1329 ntBASIC17.89■□□□□ 0.45
CFHR3Q02985 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.89■□□□□ 0.45
CFHR3Q02985 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CFHR3Q02985 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFHR3Q02985 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.88■□□□□ 0.45
CFHR3Q02985 AL356740.2-201ENST00000601559 647 ntBASIC17.88■□□□□ 0.45
CFHR3Q02985 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.88■□□□□ 0.45
CFHR3Q02985 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFHR3Q02985 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFHR3Q02985 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CFHR3Q02985 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.87■□□□□ 0.45
CFHR3Q02985 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.87■□□□□ 0.45
CFHR3Q02985 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.87■□□□□ 0.45
CFHR3Q02985 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.87■□□□□ 0.45
CFHR3Q02985 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFHR3Q02985 ALDH1A3-203ENST00000557963 1670 ntBASIC17.87■□□□□ 0.45
CFHR3Q02985 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFHR3Q02985 LINC01124-201ENST00000409786 2117 ntBASIC17.86■□□□□ 0.45
CFHR3Q02985 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFHR3Q02985 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFHR3Q02985 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.86■□□□□ 0.45
CFHR3Q02985 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.86■□□□□ 0.45
CFHR3Q02985 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.86■□□□□ 0.45
CFHR3Q02985 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.86■□□□□ 0.45
CFHR3Q02985 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFHR3Q02985 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.86■□□□□ 0.45
CFHR3Q02985 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFHR3Q02985 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFHR3Q02985 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
CFHR3Q02985 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CFHR3Q02985 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.85■□□□□ 0.45
CFHR3Q02985 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.85■□□□□ 0.45
CFHR3Q02985 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms