Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN20P56880 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.9■□□□□ 0.94
CLDN20P56880 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN20P56880 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN20P56880 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN20P56880 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN20P56880 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN20P56880 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN20P56880 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.89■□□□□ 0.94
CLDN20P56880 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN20P56880 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN20P56880 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN20P56880 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.89■□□□□ 0.93
CLDN20P56880 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN20P56880 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN20P56880 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN20P56880 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.88■□□□□ 0.93
CLDN20P56880 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CLDN20P56880 AC092028.1-203ENST00000608262 953 ntBASIC20.88■□□□□ 0.93
CLDN20P56880 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN20P56880 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLDN20P56880 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN20P56880 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN20P56880 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN20P56880 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN20P56880 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN20P56880 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN20P56880 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN20P56880 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN20P56880 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN20P56880 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN20P56880 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
CLDN20P56880 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN20P56880 TSPY9P-201ENST00000440215 945 ntBASIC20.86■□□□□ 0.93
CLDN20P56880 TSPY11P-201ENST00000442607 1045 ntBASIC20.86■□□□□ 0.93
CLDN20P56880 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN20P56880 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN20P56880 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN20P56880 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLDN20P56880 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN20P56880 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN20P56880 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN20P56880 UNC93B8-201ENST00000511903 705 ntBASIC20.85■□□□□ 0.93
CLDN20P56880 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.85■□□□□ 0.93
CLDN20P56880 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN20P56880 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN20P56880 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN20P56880 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN20P56880 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN20P56880 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN20P56880 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN20P56880 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN20P56880 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLDN20P56880 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
CLDN20P56880 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN20P56880 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN20P56880 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLDN20P56880 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN20P56880 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN20P56880 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.83■□□□□ 0.93
CLDN20P56880 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN20P56880 HLA-L-211ENST00000482052 1765 ntBASIC20.82■□□□□ 0.92
CLDN20P56880 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN20P56880 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN20P56880 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN20P56880 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
CLDN20P56880 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
CLDN20P56880 AL356441.2-201ENST00000443009 864 ntBASIC20.82■□□□□ 0.92
CLDN20P56880 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN20P56880 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLDN20P56880 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN20P56880 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN20P56880 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN20P56880 AP003733.4-201ENST00000623785 1697 ntBASIC20.82■□□□□ 0.92
CLDN20P56880 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CLDN20P56880 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN20P56880 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN20P56880 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms