Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH11P55287 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH11P55287 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH11P55287 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH11P55287 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH11P55287 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CDH11P55287 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CDH11P55287 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH11P55287 AL035685.1-201ENST00000636663 812 ntBASIC20.83■□□□□ 0.93
CDH11P55287 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH11P55287 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH11P55287 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH11P55287 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH11P55287 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH11P55287 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.83■□□□□ 0.92
CDH11P55287 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH11P55287 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH11P55287 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH11P55287 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH11P55287 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH11P55287 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH11P55287 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH11P55287 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH11P55287 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH11P55287 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH11P55287 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH11P55287 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH11P55287 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH11P55287 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH11P55287 RPS2P7-201ENST00000447334 885 ntBASIC20.81■□□□□ 0.92
CDH11P55287 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.81■□□□□ 0.92
CDH11P55287 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDH11P55287 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH11P55287 AC087393.1-201ENST00000582896 145 ntBASIC20.81■□□□□ 0.92
CDH11P55287 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH11P55287 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH11P55287 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH11P55287 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.8■□□□□ 0.92
CDH11P55287 AC103834.1-201ENST00000520383 144 ntBASIC20.8■□□□□ 0.92
CDH11P55287 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH11P55287 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH11P55287 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH11P55287 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CDH11P55287 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH11P55287 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDH11P55287 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH11P55287 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH11P55287 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH11P55287 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDH11P55287 MIR4508-201ENST00000584178 70 ntBASIC20.79■□□□□ 0.92
CDH11P55287 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH11P55287 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH11P55287 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDH11P55287 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDH11P55287 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH11P55287 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH11P55287 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.78■□□□□ 0.92
CDH11P55287 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH11P55287 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
CDH11P55287 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH11P55287 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH11P55287 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH11P55287 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.77■□□□□ 0.92
CDH11P55287 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH11P55287 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH11P55287 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH11P55287 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH11P55287 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH11P55287 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.77■□□□□ 0.91
CDH11P55287 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CDH11P55287 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 KRT18P10-201ENST00000388836 1287 ntBASIC20.76■□□□□ 0.91
CDH11P55287 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH11P55287 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH11P55287 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH11P55287 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH11P55287 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH11P55287 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH11P55287 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH11P55287 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms