Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CDKN1AP38936 AL355001.2-201ENST00000620617 1191 ntBASIC19.52■□□□□ 0.72
CDKN1AP38936 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDKN1AP38936 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.51■□□□□ 0.71
CDKN1AP38936 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKN1AP38936 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKN1AP38936 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.51■□□□□ 0.71
CDKN1AP38936 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKN1AP38936 RARRES2P6-201ENST00000567333 442 ntBASIC19.51■□□□□ 0.71
CDKN1AP38936 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.51■□□□□ 0.71
CDKN1AP38936 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDKN1AP38936 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKN1AP38936 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKN1AP38936 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDKN1AP38936 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDKN1AP38936 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDKN1AP38936 SYT6-210ENST00000641643 1587 ntBASIC19.5■□□□□ 0.71
CDKN1AP38936 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKN1AP38936 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKN1AP38936 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDKN1AP38936 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKN1AP38936 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKN1AP38936 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CDKN1AP38936 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDKN1AP38936 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.5■□□□□ 0.71
CDKN1AP38936 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CDKN1AP38936 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CDKN1AP38936 DUX4L19-201ENST00000557448 1267 ntBASIC19.49■□□□□ 0.71
CDKN1AP38936 AF213884.3-201ENST00000563833 479 ntBASIC19.49■□□□□ 0.71
CDKN1AP38936 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.49■□□□□ 0.71
CDKN1AP38936 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKN1AP38936 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKN1AP38936 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN1AP38936 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CDKN1AP38936 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDKN1AP38936 AC105265.2-201ENST00000467189 838 ntBASIC19.48■□□□□ 0.71
CDKN1AP38936 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.48■□□□□ 0.71
CDKN1AP38936 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.48■□□□□ 0.71
CDKN1AP38936 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN1AP38936 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN1AP38936 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN1AP38936 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN1AP38936 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN1AP38936 DUSP8P4-201ENST00000399538 1761 ntBASIC19.47■□□□□ 0.71
CDKN1AP38936 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN1AP38936 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN1AP38936 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDKN1AP38936 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKN1AP38936 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKN1AP38936 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKN1AP38936 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDKN1AP38936 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKN1AP38936 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN1AP38936 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.46■□□□□ 0.71
CDKN1AP38936 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN1AP38936 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
CDKN1AP38936 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
CDKN1AP38936 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN1AP38936 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDKN1AP38936 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKN1AP38936 AL022069.1-201ENST00000568025 1636 ntBASIC19.45■□□□□ 0.7
CDKN1AP38936 AC099791.2-201ENST00000605725 427 ntBASIC19.45■□□□□ 0.7
CDKN1AP38936 AC092171.4-201ENST00000609130 632 ntBASIC19.45■□□□□ 0.7
CDKN1AP38936 MIR6089-201ENST00000616698 64 ntBASIC19.45■□□□□ 0.7
CDKN1AP38936 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN1AP38936 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDKN1AP38936 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKN1AP38936 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKN1AP38936 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDKN1AP38936 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN1AP38936 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN1AP38936 MIR4767-201ENST00000582827 78 ntBASIC19.44■□□□□ 0.7
CDKN1AP38936 AL136967.2-201ENST00000623968 743 ntBASIC19.44■□□□□ 0.7
CDKN1AP38936 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKN1AP38936 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDKN1AP38936 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKN1AP38936 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKN1AP38936 AC091060.1-201ENST00000623524 1766 ntBASIC19.43■□□□□ 0.7
CDKN1AP38936 SERBP1P1-201ENST00000396021 1160 ntBASIC19.43■□□□□ 0.7
CDKN1AP38936 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKN1AP38936 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.43■□□□□ 0.7
CDKN1AP38936 AP001330.3-201ENST00000520123 633 ntBASIC19.43■□□□□ 0.7
CDKN1AP38936 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKN1AP38936 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKN1AP38936 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKN1AP38936 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKN1AP38936 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKN1AP38936 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKN1AP38936 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
CDKN1AP38936 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKN1AP38936 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms