Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD40P25942 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD40P25942 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD40P25942 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD40P25942 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.8■□□□□ 0.76
CD40P25942 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD40P25942 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.8■□□□□ 0.76
CD40P25942 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD40P25942 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.8■□□□□ 0.76
CD40P25942 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CD40P25942 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.8■□□□□ 0.76
CD40P25942 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.8■□□□□ 0.76
CD40P25942 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.8■□□□□ 0.76
CD40P25942 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD40P25942 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.8■□□□□ 0.76
CD40P25942 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD40P25942 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.79■□□□□ 0.76
CD40P25942 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 AL139246.5-201ENST00000606645 996 ntBASIC19.79■□□□□ 0.76
CD40P25942 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CD40P25942 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CD40P25942 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD40P25942 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD40P25942 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD40P25942 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD40P25942 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.78■□□□□ 0.76
CD40P25942 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.78■□□□□ 0.76
CD40P25942 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CD40P25942 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD40P25942 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CD40P25942 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD40P25942 AC138932.3-201ENST00000567634 1902 ntBASIC19.78■□□□□ 0.76
CD40P25942 AC020928.2-201ENST00000588717 2197 ntBASIC19.77■□□□□ 0.76
CD40P25942 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.77■□□□□ 0.76
CD40P25942 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD40P25942 SRD5A1P1-201ENST00000442297 786 ntBASIC19.77■□□□□ 0.76
CD40P25942 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.77■□□□□ 0.76
CD40P25942 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.77■□□□□ 0.76
CD40P25942 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD40P25942 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CD40P25942 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CD40P25942 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.76■□□□□ 0.75
CD40P25942 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD40P25942 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.76■□□□□ 0.75
CD40P25942 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD40P25942 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD40P25942 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.76■□□□□ 0.75
CD40P25942 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD40P25942 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD40P25942 AC096631.2-201ENST00000436136 790 ntBASIC19.76■□□□□ 0.75
CD40P25942 AC019069.1-201ENST00000610008 1333 ntBASIC19.76■□□□□ 0.75
CD40P25942 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.75■□□□□ 0.75
CD40P25942 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.75■□□□□ 0.75
CD40P25942 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.75■□□□□ 0.75
CD40P25942 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.75■□□□□ 0.75
CD40P25942 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD40P25942 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CD40P25942 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.75■□□□□ 0.75
CD40P25942 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.75■□□□□ 0.75
CD40P25942 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.74■□□□□ 0.75
CD40P25942 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CD40P25942 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CD40P25942 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CD40P25942 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.74■□□□□ 0.75
CD40P25942 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
CD40P25942 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CD40P25942 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.74■□□□□ 0.75
CD40P25942 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.74■□□□□ 0.75
CD40P25942 AC135731.1-201ENST00000569415 2548 ntBASIC19.74■□□□□ 0.75
CD40P25942 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD40P25942 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.73■□□□□ 0.75
CD40P25942 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.73■□□□□ 0.75
CD40P25942 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CD40P25942 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 AC110285.6-201ENST00000617652 491 ntBASIC19.73■□□□□ 0.75
CD40P25942 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CD40P25942 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CD40P25942 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CD40P25942 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD40P25942 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD40P25942 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD40P25942 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms