Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PDE6GP18545 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDE6GP18545 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 AL121603.2-201ENST00000557373 2117 ntBASIC14.19□□□□□ -0.14
PDE6GP18545 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDE6GP18545 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDE6GP18545 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6GP18545 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PDE6GP18545 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PDE6GP18545 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
PDE6GP18545 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDE6GP18545 EBPL-202ENST00000378268 680 ntTSL 3 BASIC14.18□□□□□ -0.14
PDE6GP18545 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6GP18545 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.18□□□□□ -0.14
PDE6GP18545 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6GP18545 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.17□□□□□ -0.14
PDE6GP18545 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6GP18545 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 AC007375.3-201ENST00000600936 2314 ntBASIC14.17□□□□□ -0.14
PDE6GP18545 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 LSR-205ENST00000427250 1606 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6GP18545 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PDE6GP18545 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6GP18545 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6GP18545 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PDE6GP18545 AC138932.1-201ENST00000534164 6830 ntBASIC14.17□□□□□ -0.14
PDE6GP18545 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6GP18545 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC14.17□□□□□ -0.14
PDE6GP18545 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PDE6GP18545 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.16□□□□□ -0.14
PDE6GP18545 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.16□□□□□ -0.14
PDE6GP18545 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.16□□□□□ -0.14
PDE6GP18545 RPS2-209ENST00000529806 993 ntTSL 3 BASIC14.16□□□□□ -0.14
PDE6GP18545 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC14.16□□□□□ -0.14
PDE6GP18545 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.16□□□□□ -0.14
PDE6GP18545 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC14.16□□□□□ -0.14
PDE6GP18545 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PDE6GP18545 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PDE6GP18545 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6GP18545 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDE6GP18545 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PDE6GP18545 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6GP18545 AC108673.1-201ENST00000510422 1159 ntBASIC14.15□□□□□ -0.14
PDE6GP18545 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
PDE6GP18545 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PDE6GP18545 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6GP18545 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDE6GP18545 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.15□□□□□ -0.14
PDE6GP18545 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC14.15□□□□□ -0.14
PDE6GP18545 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.15□□□□□ -0.14
PDE6GP18545 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6GP18545 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
PDE6GP18545 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PDE6GP18545 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.14□□□□□ -0.15
PDE6GP18545 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms