Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL4AP11441 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL4AP11441 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL4AP11441 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.08■□□□□ 0.97
UBL4AP11441 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.08■□□□□ 0.97
UBL4AP11441 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
UBL4AP11441 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL4AP11441 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBL4AP11441 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBL4AP11441 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBL4AP11441 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
UBL4AP11441 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBL4AP11441 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBL4AP11441 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
UBL4AP11441 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.07■□□□□ 0.96
UBL4AP11441 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.07■□□□□ 0.96
UBL4AP11441 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
UBL4AP11441 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBL4AP11441 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.07■□□□□ 0.96
UBL4AP11441 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
UBL4AP11441 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
UBL4AP11441 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.06■□□□□ 0.96
UBL4AP11441 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBL4AP11441 AC131274.2-201ENST00000580697 1507 ntBASIC21.06■□□□□ 0.96
UBL4AP11441 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBL4AP11441 RARRES2P1-201ENST00000474487 481 ntBASIC21.06■□□□□ 0.96
UBL4AP11441 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBL4AP11441 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBL4AP11441 ABCB10P4-201ENST00000566803 2184 ntBASIC21.05■□□□□ 0.96
UBL4AP11441 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBL4AP11441 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBL4AP11441 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBL4AP11441 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBL4AP11441 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBL4AP11441 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBL4AP11441 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL4AP11441 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL4AP11441 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL4AP11441 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.04■□□□□ 0.96
UBL4AP11441 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.04■□□□□ 0.96
UBL4AP11441 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.04■□□□□ 0.96
UBL4AP11441 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
UBL4AP11441 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL4AP11441 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.04■□□□□ 0.96
UBL4AP11441 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL4AP11441 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.04■□□□□ 0.96
UBL4AP11441 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBL4AP11441 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL4AP11441 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBL4AP11441 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBL4AP11441 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
UBL4AP11441 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBL4AP11441 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBL4AP11441 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
UBL4AP11441 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBL4AP11441 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBL4AP11441 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBL4AP11441 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBL4AP11441 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBL4AP11441 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
UBL4AP11441 AC137630.3-201ENST00000607245 391 ntBASIC21.01■□□□□ 0.95
UBL4AP11441 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UBL4AP11441 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBL4AP11441 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL4AP11441 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBL4AP11441 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBL4AP11441 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21■□□□□ 0.95
UBL4AP11441 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
UBL4AP11441 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21■□□□□ 0.95
UBL4AP11441 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL4AP11441 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL4AP11441 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21■□□□□ 0.95
UBL4AP11441 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21■□□□□ 0.95
UBL4AP11441 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL4AP11441 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21■□□□□ 0.95
UBL4AP11441 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL4AP11441 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.99■□□□□ 0.95
UBL4AP11441 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL4AP11441 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.99■□□□□ 0.95
UBL4AP11441 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBL4AP11441 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL4AP11441 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.99■□□□□ 0.95
UBL4AP11441 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.99■□□□□ 0.95
UBL4AP11441 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBL4AP11441 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.98■□□□□ 0.95
UBL4AP11441 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBL4AP11441 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBL4AP11441 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UBL4AP11441 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 BX664725.1-201ENST00000438252 379 ntBASIC20.98■□□□□ 0.95
UBL4AP11441 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms