Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 AC090877.2-201ENST00000558441 1738 ntBASIC20.47■□□□□ 0.87
MRPL3P09001 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MRPL3P09001 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MRPL3P09001 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MRPL3P09001 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MRPL3P09001 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MRPL3P09001 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MRPL3P09001 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
MRPL3P09001 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.46■□□□□ 0.87
MRPL3P09001 ANOS2P-203ENST00000472227 1816 ntBASIC20.46■□□□□ 0.87
MRPL3P09001 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MRPL3P09001 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MRPL3P09001 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.45■□□□□ 0.86
MRPL3P09001 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MRPL3P09001 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.44■□□□□ 0.86
MRPL3P09001 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
MRPL3P09001 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 SPCS2P3-201ENST00000500401 656 ntBASIC20.44■□□□□ 0.86
MRPL3P09001 AL592293.1-201ENST00000502889 1188 ntBASIC20.44■□□□□ 0.86
MRPL3P09001 AC018755.3-202ENST00000596210 929 ntBASIC20.44■□□□□ 0.86
MRPL3P09001 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL3P09001 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.44■□□□□ 0.86
MRPL3P09001 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
MRPL3P09001 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.43■□□□□ 0.86
MRPL3P09001 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.43■□□□□ 0.86
MRPL3P09001 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.43■□□□□ 0.86
MRPL3P09001 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.43■□□□□ 0.86
MRPL3P09001 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.43■□□□□ 0.86
MRPL3P09001 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.43■□□□□ 0.86
MRPL3P09001 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL3P09001 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPL3P09001 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPL3P09001 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MRPL3P09001 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPL3P09001 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPL3P09001 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MRPL3P09001 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPL3P09001 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MRPL3P09001 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPL3P09001 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
MRPL3P09001 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.41■□□□□ 0.86
MRPL3P09001 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.41■□□□□ 0.86
MRPL3P09001 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MRPL3P09001 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MRPL3P09001 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MRPL3P09001 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPL3P09001 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MRPL3P09001 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MRPL3P09001 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
MRPL3P09001 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL3P09001 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL3P09001 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL3P09001 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MRPL3P09001 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL3P09001 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPL3P09001 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPL3P09001 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL3P09001 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MRPL3P09001 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.4■□□□□ 0.86
MRPL3P09001 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL3P09001 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRPL3P09001 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
MRPL3P09001 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRPL3P09001 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.39■□□□□ 0.86
MRPL3P09001 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.39■□□□□ 0.86
MRPL3P09001 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.39■□□□□ 0.86
MRPL3P09001 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
MRPL3P09001 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.39■□□□□ 0.85
MRPL3P09001 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL3P09001 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL3P09001 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MRPL3P09001 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.39■□□□□ 0.85
MRPL3P09001 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL3P09001 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL3P09001 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL3P09001 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MRPL3P09001 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL3P09001 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL3P09001 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms