Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.49■■□□□ 1.51
RB1P06400 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RB1P06400 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RB1P06400 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RB1P06400 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.48■■□□□ 1.51
RB1P06400 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RB1P06400 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RB1P06400 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RB1P06400 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.48■■□□□ 1.51
RB1P06400 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
RB1P06400 AL022069.1-201ENST00000568025 1636 ntBASIC24.48■■□□□ 1.51
RB1P06400 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.48■■□□□ 1.51
RB1P06400 RARRES2P11-201ENST00000635158 484 ntBASIC24.48■■□□□ 1.51
RB1P06400 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RB1P06400 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RB1P06400 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RB1P06400 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.47■■□□□ 1.51
RB1P06400 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RB1P06400 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RB1P06400 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RB1P06400 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.46■■□□□ 1.51
RB1P06400 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RB1P06400 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RB1P06400 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.46■■□□□ 1.51
RB1P06400 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.46■■□□□ 1.51
RB1P06400 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RB1P06400 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RB1P06400 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RB1P06400 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.45■■□□□ 1.5
RB1P06400 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.45■■□□□ 1.5
RB1P06400 AC090192.1-201ENST00000517740 490 ntBASIC24.45■■□□□ 1.5
RB1P06400 MIR3181-201ENST00000578512 73 ntBASIC24.45■■□□□ 1.5
RB1P06400 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.45■■□□□ 1.5
RB1P06400 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RB1P06400 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.45■■□□□ 1.5
RB1P06400 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.45■■□□□ 1.5
RB1P06400 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RB1P06400 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.44■■□□□ 1.5
RB1P06400 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
RB1P06400 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RB1P06400 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RB1P06400 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.44■■□□□ 1.5
RB1P06400 AC009086.3-201ENST00000623486 1008 ntBASIC24.44■■□□□ 1.5
RB1P06400 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RB1P06400 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.44■■□□□ 1.5
RB1P06400 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RB1P06400 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RB1P06400 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RB1P06400 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.43■■□□□ 1.5
RB1P06400 AC006455.2-201ENST00000429931 906 ntBASIC24.43■■□□□ 1.5
RB1P06400 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RB1P06400 AC022517.1-201ENST00000592429 346 ntBASIC24.43■■□□□ 1.5
RB1P06400 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.43■■□□□ 1.5
RB1P06400 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RB1P06400 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.42■■□□□ 1.5
RB1P06400 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.42■■□□□ 1.5
RB1P06400 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RB1P06400 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.42■■□□□ 1.5
RB1P06400 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.42■■□□□ 1.5
RB1P06400 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.42■■□□□ 1.5
RB1P06400 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.42■■□□□ 1.5
RB1P06400 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RB1P06400 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RB1P06400 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RB1P06400 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
RB1P06400 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RB1P06400 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RB1P06400 YBX1P1-201ENST00000445822 960 ntBASIC24.41■■□□□ 1.5
RB1P06400 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RB1P06400 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RB1P06400 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.4■■□□□ 1.5
RB1P06400 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RB1P06400 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RB1P06400 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.4■■□□□ 1.5
RB1P06400 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.4■■□□□ 1.5
RB1P06400 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RB1P06400 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RB1P06400 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RB1P06400 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.39■■□□□ 1.49
RB1P06400 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.39■■□□□ 1.49
RB1P06400 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.39■■□□□ 1.49
RB1P06400 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RB1P06400 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.39■■□□□ 1.49
RB1P06400 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.39■■□□□ 1.49
RB1P06400 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.39■■□□□ 1.49
RB1P06400 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.39■■□□□ 1.49
RB1P06400 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RB1P06400 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.38■■□□□ 1.49
RB1P06400 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RB1P06400 AC126544.1-201ENST00000580842 1059 ntBASIC24.38■■□□□ 1.49
RB1P06400 AL137784.2-201ENST00000607332 1000 ntBASIC24.38■■□□□ 1.49
RB1P06400 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RB1P06400 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RB1P06400 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.37■■□□□ 1.49
RB1P06400 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.37■■□□□ 1.49
RB1P06400 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RB1P06400 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RB1P06400 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
RB1P06400 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RB1P06400 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms