Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
COL5A2P05997 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
COL5A2P05997 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
COL5A2P05997 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.69■■■□□ 2.5
COL5A2P05997 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
COL5A2P05997 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC30.69■■■□□ 2.5
COL5A2P05997 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
COL5A2P05997 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.68■■■□□ 2.5
COL5A2P05997 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
COL5A2P05997 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
COL5A2P05997 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
COL5A2P05997 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.67■■■□□ 2.5
COL5A2P05997 AC022517.1-201ENST00000592429 346 ntBASIC30.67■■■□□ 2.5
COL5A2P05997 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL5A2P05997 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL5A2P05997 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL5A2P05997 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.66■■■□□ 2.5
COL5A2P05997 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
COL5A2P05997 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.65■■■□□ 2.5
COL5A2P05997 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL5A2P05997 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL5A2P05997 YBX1P1-201ENST00000445822 960 ntBASIC30.65■■■□□ 2.5
COL5A2P05997 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC30.65■■■□□ 2.5
COL5A2P05997 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.65■■■□□ 2.5
COL5A2P05997 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.65■■■□□ 2.5
COL5A2P05997 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL5A2P05997 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL5A2P05997 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.64■■■□□ 2.5
COL5A2P05997 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.64■■■□□ 2.5
COL5A2P05997 MIR3181-201ENST00000578512 73 ntBASIC30.64■■■□□ 2.5
COL5A2P05997 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL5A2P05997 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
COL5A2P05997 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL5A2P05997 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
COL5A2P05997 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.64■■■□□ 2.49
COL5A2P05997 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.49
COL5A2P05997 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
COL5A2P05997 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L2-201ENST00000561772 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.63■■■□□ 2.49
COL5A2P05997 AC009086.3-201ENST00000623486 1008 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L6-201ENST00000626483 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L1-201ENST00000627662 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L8-201ENST00000629013 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L3-201ENST00000630187 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L7-201ENST00000630678 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DUX4L5-201ENST00000630834 1275 ntBASIC30.63■■■□□ 2.49
COL5A2P05997 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
COL5A2P05997 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.63■■■□□ 2.49
COL5A2P05997 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.63■■■□□ 2.49
COL5A2P05997 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
COL5A2P05997 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.62■■■□□ 2.49
COL5A2P05997 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL5A2P05997 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL5A2P05997 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL5A2P05997 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL5A2P05997 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL5A2P05997 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL5A2P05997 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.62■■■□□ 2.49
COL5A2P05997 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL5A2P05997 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
COL5A2P05997 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.61■■■□□ 2.49
COL5A2P05997 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
COL5A2P05997 AL137784.2-201ENST00000607332 1000 ntBASIC30.61■■■□□ 2.49
COL5A2P05997 MIR6089-201ENST00000616698 64 ntBASIC30.61■■■□□ 2.49
COL5A2P05997 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.61■■■□□ 2.49
COL5A2P05997 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL5A2P05997 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL5A2P05997 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
COL5A2P05997 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
COL5A2P05997 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
COL5A2P05997 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL5A2P05997 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.59■■■□□ 2.49
COL5A2P05997 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL5A2P05997 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
COL5A2P05997 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.59■■■□□ 2.49
COL5A2P05997 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.58■■■□□ 2.49
COL5A2P05997 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.58■■■□□ 2.49
COL5A2P05997 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL5A2P05997 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC30.58■■■□□ 2.49
COL5A2P05997 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.58■■■□□ 2.49
COL5A2P05997 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC30.58■■■□□ 2.49
COL5A2P05997 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL5A2P05997 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.57■■■□□ 2.48
COL5A2P05997 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.57■■■□□ 2.48
COL5A2P05997 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL5A2P05997 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.57■■■□□ 2.48
COL5A2P05997 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.57■■■□□ 2.48
COL5A2P05997 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
COL5A2P05997 AC027612.3-201ENST00000413684 1047 ntBASIC30.57■■■□□ 2.48
COL5A2P05997 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL5A2P05997 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.57■■■□□ 2.48
COL5A2P05997 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.57■■■□□ 2.48
COL5A2P05997 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.56■■■□□ 2.48
COL5A2P05997 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
COL5A2P05997 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.56■■■□□ 2.48
COL5A2P05997 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.56■■■□□ 2.48
COL5A2P05997 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL5A2P05997 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms