Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRAP04437 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.39■□□□□ 0.37
TCRAP04437 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRAP04437 C1orf229-201ENST00000623686 2258 ntBASIC17.38■□□□□ 0.37
TCRAP04437 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 LINC00565-201ENST00000562710 2331 ntBASIC17.38■□□□□ 0.37
TCRAP04437 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TCRAP04437 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TCRAP04437 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRAP04437 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TCRAP04437 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TCRAP04437 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRAP04437 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRAP04437 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRAP04437 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRAP04437 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TCRAP04437 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRAP04437 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRAP04437 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRAP04437 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TCRAP04437 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRAP04437 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TCRAP04437 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRAP04437 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TCRAP04437 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRAP04437 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRAP04437 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TCRAP04437 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TCRAP04437 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRAP04437 ABHD17AP4-201ENST00000411545 909 ntBASIC17.35■□□□□ 0.37
TCRAP04437 AL161729.1-201ENST00000604104 1402 ntBASIC17.35■□□□□ 0.37
TCRAP04437 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TCRAP04437 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRAP04437 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRAP04437 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRAP04437 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRAP04437 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRAP04437 AC007029.1-201ENST00000604183 313 ntBASIC17.34■□□□□ 0.37
TCRAP04437 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRAP04437 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRAP04437 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRAP04437 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRAP04437 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRAP04437 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRAP04437 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRAP04437 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TCRAP04437 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRAP04437 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRAP04437 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRAP04437 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRAP04437 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRAP04437 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRAP04437 GUSBP5-202ENST00000510805 1989 ntBASIC17.33■□□□□ 0.36
TCRAP04437 LINC00526-201ENST00000581067 1875 ntBASIC17.33■□□□□ 0.36
TCRAP04437 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRAP04437 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TCRAP04437 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRAP04437 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TCRAP04437 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TCRAP04437 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms