Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.39■■□□□ 1.33
PDGFBP01127 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.39■■□□□ 1.33
PDGFBP01127 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.39■■□□□ 1.33
PDGFBP01127 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDGFBP01127 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDGFBP01127 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.38■■□□□ 1.33
PDGFBP01127 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.38■■□□□ 1.33
PDGFBP01127 AC241377.3-202ENST00000626088 1088 ntBASIC23.38■■□□□ 1.33
PDGFBP01127 AC241585.3-202ENST00000628937 1088 ntBASIC23.38■■□□□ 1.33
PDGFBP01127 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.38■■□□□ 1.33
PDGFBP01127 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDGFBP01127 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDGFBP01127 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDGFBP01127 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PDGFBP01127 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDGFBP01127 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDGFBP01127 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.37■■□□□ 1.33
PDGFBP01127 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.37■■□□□ 1.33
PDGFBP01127 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PDGFBP01127 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDGFBP01127 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDGFBP01127 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDGFBP01127 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDGFBP01127 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDGFBP01127 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PDGFBP01127 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDGFBP01127 AC131274.2-201ENST00000580697 1507 ntBASIC23.35■■□□□ 1.33
PDGFBP01127 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PDGFBP01127 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDGFBP01127 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDGFBP01127 AL358852.1-201ENST00000623174 1268 ntBASIC23.35■■□□□ 1.33
PDGFBP01127 AC009086.3-201ENST00000623486 1008 ntBASIC23.35■■□□□ 1.33
PDGFBP01127 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.35■■□□□ 1.33
PDGFBP01127 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.35■■□□□ 1.33
PDGFBP01127 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
PDGFBP01127 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFBP01127 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.34■■□□□ 1.33
PDGFBP01127 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFBP01127 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFBP01127 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFBP01127 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFBP01127 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFBP01127 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFBP01127 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFBP01127 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.33■■□□□ 1.33
PDGFBP01127 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.33■■□□□ 1.33
PDGFBP01127 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.33■■□□□ 1.33
PDGFBP01127 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFBP01127 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.33■■□□□ 1.32
PDGFBP01127 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDGFBP01127 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
PDGFBP01127 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDGFBP01127 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFBP01127 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFBP01127 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.32■■□□□ 1.32
PDGFBP01127 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.32■■□□□ 1.32
PDGFBP01127 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PDGFBP01127 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFBP01127 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFBP01127 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFBP01127 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFBP01127 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFBP01127 KRT18P14-201ENST00000534205 1250 ntBASIC23.31■■□□□ 1.32
PDGFBP01127 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.31■■□□□ 1.32
PDGFBP01127 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFBP01127 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PDGFBP01127 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PDGFBP01127 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFBP01127 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PDGFBP01127 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFBP01127 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFBP01127 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFBP01127 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.3■■□□□ 1.32
PDGFBP01127 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.3■■□□□ 1.32
PDGFBP01127 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFBP01127 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PDGFBP01127 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDGFBP01127 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.29■■□□□ 1.32
PDGFBP01127 AC012414.1-201ENST00000556676 535 ntBASIC23.29■■□□□ 1.32
PDGFBP01127 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.29■■□□□ 1.32
PDGFBP01127 AC080038.1-201ENST00000611274 1154 ntBASIC23.29■■□□□ 1.32
PDGFBP01127 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDGFBP01127 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PDGFBP01127 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.29■■□□□ 1.32
PDGFBP01127 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFBP01127 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFBP01127 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.28■■□□□ 1.32
PDGFBP01127 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.28■■□□□ 1.32
PDGFBP01127 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFBP01127 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.28■■□□□ 1.32
PDGFBP01127 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.28■■□□□ 1.32
PDGFBP01127 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.28■■□□□ 1.32
PDGFBP01127 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.28■■□□□ 1.32
PDGFBP01127 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFBP01127 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFBP01127 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFBP01127 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
PDGFBP01127 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PDGFBP01127 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDGFBP01127 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms