Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN1O95832 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN1O95832 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN1O95832 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.4■□□□□ 0.86
CLDN1O95832 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN1O95832 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN1O95832 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN1O95832 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN1O95832 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN1O95832 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.4■□□□□ 0.86
CLDN1O95832 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN1O95832 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN1O95832 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN1O95832 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.39■□□□□ 0.86
CLDN1O95832 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CLDN1O95832 FOXO3B-201ENST00000395675 1928 ntBASIC20.39■□□□□ 0.86
CLDN1O95832 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN1O95832 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN1O95832 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN1O95832 AC004911.1-201ENST00000416316 871 ntBASIC20.39■□□□□ 0.85
CLDN1O95832 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN1O95832 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN1O95832 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN1O95832 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN1O95832 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CLDN1O95832 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN1O95832 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN1O95832 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN1O95832 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
CLDN1O95832 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN1O95832 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN1O95832 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.38■□□□□ 0.85
CLDN1O95832 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN1O95832 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN1O95832 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN1O95832 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN1O95832 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN1O95832 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN1O95832 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN1O95832 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN1O95832 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN1O95832 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN1O95832 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN1O95832 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLDN1O95832 AC011298.3-201ENST00000615796 283 ntBASIC20.37■□□□□ 0.85
CLDN1O95832 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN1O95832 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN1O95832 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN1O95832 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLDN1O95832 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLDN1O95832 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN1O95832 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN1O95832 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN1O95832 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN1O95832 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN1O95832 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.36■□□□□ 0.85
CLDN1O95832 AL031602.1-201ENST00000633169 911 ntBASIC20.36■□□□□ 0.85
CLDN1O95832 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN1O95832 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN1O95832 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN1O95832 AC090877.2-201ENST00000558441 1738 ntBASIC20.36■□□□□ 0.85
CLDN1O95832 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN1O95832 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN1O95832 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN1O95832 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN1O95832 AC099791.2-201ENST00000605725 427 ntBASIC20.35■□□□□ 0.85
CLDN1O95832 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN1O95832 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN1O95832 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN1O95832 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN1O95832 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN1O95832 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLDN1O95832 AC091060.1-201ENST00000623524 1766 ntBASIC20.34■□□□□ 0.85
CLDN1O95832 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CLDN1O95832 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN1O95832 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN1O95832 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN1O95832 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN1O95832 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN1O95832 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN1O95832 AC005703.6-201ENST00000623265 1329 ntBASIC20.33■□□□□ 0.85
CLDN1O95832 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN1O95832 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN1O95832 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN1O95832 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN1O95832 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN1O95832 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLDN1O95832 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN1O95832 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.33■□□□□ 0.85
CLDN1O95832 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN1O95832 AL138724.1-201ENST00000606771 1088 ntBASIC20.33■□□□□ 0.85
CLDN1O95832 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN1O95832 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN1O95832 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN1O95832 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN1O95832 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN1O95832 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN1O95832 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLDN1O95832 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN1O95832 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms