Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SCGB2A1O75556 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
SCGB2A1O75556 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.99■□□□□ 0.47
SCGB2A1O75556 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCGB2A1O75556 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.98■□□□□ 0.47
SCGB2A1O75556 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
SCGB2A1O75556 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCGB2A1O75556 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCGB2A1O75556 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
SCGB2A1O75556 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SCGB2A1O75556 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SCGB2A1O75556 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.97■□□□□ 0.47
SCGB2A1O75556 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCGB2A1O75556 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCGB2A1O75556 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCGB2A1O75556 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCGB2A1O75556 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCGB2A1O75556 ABHD17AP5-201ENST00000580133 923 ntBASIC17.97■□□□□ 0.47
SCGB2A1O75556 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SCGB2A1O75556 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCGB2A1O75556 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.96■□□□□ 0.47
SCGB2A1O75556 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCGB2A1O75556 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SCGB2A1O75556 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCGB2A1O75556 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCGB2A1O75556 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SCGB2A1O75556 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SCGB2A1O75556 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
SCGB2A1O75556 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCGB2A1O75556 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCGB2A1O75556 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SCGB2A1O75556 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCGB2A1O75556 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCGB2A1O75556 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCGB2A1O75556 SPCS2P3-201ENST00000500401 656 ntBASIC17.95■□□□□ 0.46
SCGB2A1O75556 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.95■□□□□ 0.46
SCGB2A1O75556 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SCGB2A1O75556 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCGB2A1O75556 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.94■□□□□ 0.46
SCGB2A1O75556 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 LONRF2P2-201ENST00000439212 571 ntBASIC17.94■□□□□ 0.46
SCGB2A1O75556 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.94■□□□□ 0.46
SCGB2A1O75556 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.94■□□□□ 0.46
SCGB2A1O75556 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.94■□□□□ 0.46
SCGB2A1O75556 AC129492.7-201ENST00000622992 756 ntBASIC17.94■□□□□ 0.46
SCGB2A1O75556 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.94■□□□□ 0.46
SCGB2A1O75556 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCGB2A1O75556 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.93■□□□□ 0.46
SCGB2A1O75556 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SCGB2A1O75556 AC019171.1-201ENST00000601251 1056 ntBASIC17.93■□□□□ 0.46
SCGB2A1O75556 U85056.1-201ENST00000616429 682 ntBASIC17.93■□□□□ 0.46
SCGB2A1O75556 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.93■□□□□ 0.46
SCGB2A1O75556 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 AL022069.1-201ENST00000568025 1636 ntBASIC17.93■□□□□ 0.46
SCGB2A1O75556 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCGB2A1O75556 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SCGB2A1O75556 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.92■□□□□ 0.46
SCGB2A1O75556 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.92■□□□□ 0.46
SCGB2A1O75556 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SCGB2A1O75556 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.92■□□□□ 0.46
SCGB2A1O75556 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCGB2A1O75556 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCGB2A1O75556 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 BHLHE23-202ENST00000612929 1109 ntBASIC17.91■□□□□ 0.46
SCGB2A1O75556 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.91■□□□□ 0.46
SCGB2A1O75556 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCGB2A1O75556 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCGB2A1O75556 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms