Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SMPD2O60906 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20■□□□□ 0.79
SMPD2O60906 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20■□□□□ 0.79
SMPD2O60906 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.99■□□□□ 0.79
SMPD2O60906 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD2O60906 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.99■□□□□ 0.79
SMPD2O60906 PBX2P1-201ENST00000493219 1291 ntBASIC19.99■□□□□ 0.79
SMPD2O60906 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.99■□□□□ 0.79
SMPD2O60906 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.99■□□□□ 0.79
SMPD2O60906 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD2O60906 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMPD2O60906 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD2O60906 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD2O60906 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMPD2O60906 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD2O60906 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD2O60906 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.98■□□□□ 0.79
SMPD2O60906 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SMPD2O60906 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD2O60906 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.98■□□□□ 0.79
SMPD2O60906 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.98■□□□□ 0.79
SMPD2O60906 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.98■□□□□ 0.79
SMPD2O60906 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.98■□□□□ 0.79
SMPD2O60906 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD2O60906 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMPD2O60906 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMPD2O60906 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMPD2O60906 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.97■□□□□ 0.79
SMPD2O60906 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMPD2O60906 AC142381.2-201ENST00000566120 298 ntBASIC19.97■□□□□ 0.79
SMPD2O60906 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMPD2O60906 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMPD2O60906 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMPD2O60906 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.97■□□□□ 0.79
SMPD2O60906 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMPD2O60906 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMPD2O60906 AC135731.1-201ENST00000569415 2548 ntBASIC19.96■□□□□ 0.79
SMPD2O60906 AC106739.1-201ENST00000617035 715 ntBASIC19.96■□□□□ 0.79
SMPD2O60906 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMPD2O60906 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SMPD2O60906 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SMPD2O60906 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMPD2O60906 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMPD2O60906 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SMPD2O60906 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.79
SMPD2O60906 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMPD2O60906 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.95■□□□□ 0.78
SMPD2O60906 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMPD2O60906 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMPD2O60906 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMPD2O60906 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMPD2O60906 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 LINC01124-201ENST00000409786 2117 ntBASIC19.94■□□□□ 0.78
SMPD2O60906 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.94■□□□□ 0.78
SMPD2O60906 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.94■□□□□ 0.78
SMPD2O60906 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.94■□□□□ 0.78
SMPD2O60906 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD2O60906 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.94■□□□□ 0.78
SMPD2O60906 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD2O60906 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMPD2O60906 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD2O60906 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.93■□□□□ 0.78
SMPD2O60906 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMPD2O60906 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SMPD2O60906 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD2O60906 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD2O60906 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD2O60906 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.93■□□□□ 0.78
SMPD2O60906 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD2O60906 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMPD2O60906 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
SMPD2O60906 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD2O60906 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.92■□□□□ 0.78
SMPD2O60906 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD2O60906 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD2O60906 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.92■□□□□ 0.78
SMPD2O60906 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD2O60906 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD2O60906 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SMPD2O60906 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SMPD2O60906 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD2O60906 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD2O60906 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD2O60906 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD2O60906 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD2O60906 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD2O60906 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD2O60906 ZNRF2P3-201ENST00000424200 374 ntBASIC19.91■□□□□ 0.78
SMPD2O60906 RARRES2P6-201ENST00000567333 442 ntBASIC19.91■□□□□ 0.78
SMPD2O60906 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.91■□□□□ 0.78
SMPD2O60906 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms