Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.36■■□□□ 1.17
NPHS1O60500 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.36■■□□□ 1.17
NPHS1O60500 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPHS1O60500 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPHS1O60500 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPHS1O60500 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPHS1O60500 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
NPHS1O60500 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
NPHS1O60500 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
NPHS1O60500 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 AL117328.2-201ENST00000624617 1940 ntBASIC22.35■■□□□ 1.17
NPHS1O60500 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPHS1O60500 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPHS1O60500 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPHS1O60500 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NPHS1O60500 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.34■■□□□ 1.17
NPHS1O60500 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NPHS1O60500 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.34■■□□□ 1.17
NPHS1O60500 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.34■■□□□ 1.17
NPHS1O60500 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
NPHS1O60500 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.34■■□□□ 1.17
NPHS1O60500 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.34■■□□□ 1.17
NPHS1O60500 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
NPHS1O60500 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NPHS1O60500 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
NPHS1O60500 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.33■■□□□ 1.17
NPHS1O60500 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPHS1O60500 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
NPHS1O60500 AL022069.1-201ENST00000568025 1636 ntBASIC22.33■■□□□ 1.17
NPHS1O60500 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NPHS1O60500 MIR6765-201ENST00000614092 87 ntBASIC22.33■■□□□ 1.17
NPHS1O60500 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPHS1O60500 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.33■■□□□ 1.16
NPHS1O60500 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPHS1O60500 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.32■■□□□ 1.16
NPHS1O60500 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPHS1O60500 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPHS1O60500 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.32■■□□□ 1.16
NPHS1O60500 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.32■■□□□ 1.16
NPHS1O60500 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
NPHS1O60500 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NPHS1O60500 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NPHS1O60500 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NPHS1O60500 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPHS1O60500 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPHS1O60500 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPHS1O60500 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NPHS1O60500 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.31■■□□□ 1.16
NPHS1O60500 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.31■■□□□ 1.16
NPHS1O60500 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPHS1O60500 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPHS1O60500 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPHS1O60500 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPHS1O60500 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPHS1O60500 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
NPHS1O60500 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
NPHS1O60500 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 DUX4L9-201ENST00000449051 1259 ntBASIC22.29■■□□□ 1.16
NPHS1O60500 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.29■■□□□ 1.16
NPHS1O60500 AC233723.2-201ENST00000623798 2106 ntBASIC22.29■■□□□ 1.16
NPHS1O60500 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.29■■□□□ 1.16
NPHS1O60500 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPHS1O60500 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.28■■□□□ 1.16
NPHS1O60500 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
NPHS1O60500 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPHS1O60500 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPHS1O60500 LONRF2P2-201ENST00000439212 571 ntBASIC22.28■■□□□ 1.16
NPHS1O60500 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPHS1O60500 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPHS1O60500 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.28■■□□□ 1.16
NPHS1O60500 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPHS1O60500 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPHS1O60500 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPHS1O60500 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPHS1O60500 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
NPHS1O60500 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NPHS1O60500 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
NPHS1O60500 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
NPHS1O60500 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPHS1O60500 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
NPHS1O60500 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPHS1O60500 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms