Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SHOXO15266 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.4■□□□□ 0.7
SHOXO15266 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.4■□□□□ 0.7
SHOXO15266 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.4■□□□□ 0.7
SHOXO15266 AC022413.1-201ENST00000624602 984 ntBASIC19.4■□□□□ 0.7
SHOXO15266 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SHOXO15266 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.4■□□□□ 0.7
SHOXO15266 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SHOXO15266 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHOXO15266 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SHOXO15266 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHOXO15266 FOXO3B-201ENST00000395675 1928 ntBASIC19.39■□□□□ 0.7
SHOXO15266 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHOXO15266 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SHOXO15266 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.39■□□□□ 0.69
SHOXO15266 MIR3960-201ENST00000583311 91 ntBASIC19.39■□□□□ 0.69
SHOXO15266 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHOXO15266 SMPD5-203ENST00000639008 1464 ntBASIC19.39■□□□□ 0.69
SHOXO15266 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHOXO15266 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SHOXO15266 LINC00526-201ENST00000581067 1875 ntBASIC19.39■□□□□ 0.69
SHOXO15266 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHOXO15266 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.38■□□□□ 0.69
SHOXO15266 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.38■□□□□ 0.69
SHOXO15266 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.38■□□□□ 0.69
SHOXO15266 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHOXO15266 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.37■□□□□ 0.69
SHOXO15266 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SHOXO15266 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.37■□□□□ 0.69
SHOXO15266 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.37■□□□□ 0.69
SHOXO15266 AC025884.2-201ENST00000553429 711 ntBASIC19.37■□□□□ 0.69
SHOXO15266 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.37■□□□□ 0.69
SHOXO15266 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SHOXO15266 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHOXO15266 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.36■□□□□ 0.69
SHOXO15266 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.36■□□□□ 0.69
SHOXO15266 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SHOXO15266 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.36■□□□□ 0.69
SHOXO15266 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHOXO15266 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 AC092296.2-201ENST00000589470 999 ntBASIC19.36■□□□□ 0.69
SHOXO15266 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.36■□□□□ 0.69
SHOXO15266 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHOXO15266 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.36■□□□□ 0.69
SHOXO15266 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SHOXO15266 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.35■□□□□ 0.69
SHOXO15266 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.35■□□□□ 0.69
SHOXO15266 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SHOXO15266 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SHOXO15266 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.35■□□□□ 0.69
SHOXO15266 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHOXO15266 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
SHOXO15266 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SHOXO15266 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.34■□□□□ 0.69
SHOXO15266 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHOXO15266 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms