Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.81■■□□□ 1.08
RTCAO00442 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.81■■□□□ 1.08
RTCAO00442 AC009299.2-201ENST00000482477 511 ntBASIC21.81■■□□□ 1.08
RTCAO00442 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.81■■□□□ 1.08
RTCAO00442 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.81■■□□□ 1.08
RTCAO00442 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.81■■□□□ 1.08
RTCAO00442 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.81■■□□□ 1.08
RTCAO00442 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCAO00442 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.8■■□□□ 1.08
RTCAO00442 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCAO00442 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCAO00442 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCAO00442 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RTCAO00442 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCAO00442 BX664725.1-201ENST00000438252 379 ntBASIC21.8■■□□□ 1.08
RTCAO00442 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.8■■□□□ 1.08
RTCAO00442 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RTCAO00442 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCAO00442 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCAO00442 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCAO00442 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RTCAO00442 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCAO00442 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.79■■□□□ 1.08
RTCAO00442 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RTCAO00442 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCAO00442 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.79■■□□□ 1.08
RTCAO00442 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCAO00442 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCAO00442 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCAO00442 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCAO00442 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 AC021242.3-201ENST00000607598 1377 ntBASIC21.78■■□□□ 1.08
RTCAO00442 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.78■■□□□ 1.08
RTCAO00442 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 AC004448.1-201ENST00000458332 883 ntBASIC21.78■■□□□ 1.08
RTCAO00442 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.78■■□□□ 1.08
RTCAO00442 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCAO00442 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RTCAO00442 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RTCAO00442 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.78■■□□□ 1.08
RTCAO00442 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCAO00442 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTCAO00442 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.77■■□□□ 1.08
RTCAO00442 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTCAO00442 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.77■■□□□ 1.08
RTCAO00442 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RTCAO00442 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
RTCAO00442 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RTCAO00442 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RTCAO00442 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RTCAO00442 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTCAO00442 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RTCAO00442 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCAO00442 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.76■■□□□ 1.07
RTCAO00442 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCAO00442 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.76■■□□□ 1.07
RTCAO00442 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RTCAO00442 SNX5-217ENST00000606557 1087 ntBASIC21.76■■□□□ 1.07
RTCAO00442 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.76■■□□□ 1.07
RTCAO00442 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCAO00442 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.75■■□□□ 1.07
RTCAO00442 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.75■■□□□ 1.07
RTCAO00442 AC239859.2-201ENST00000444165 318 ntBASIC21.75■■□□□ 1.07
RTCAO00442 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RTCAO00442 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.75■■□□□ 1.07
RTCAO00442 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTCAO00442 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCAO00442 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTCAO00442 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
RTCAO00442 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCAO00442 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCAO00442 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTCAO00442 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.74■■□□□ 1.07
RTCAO00442 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.74■■□□□ 1.07
RTCAO00442 ALDH1A3-203ENST00000557963 1670 ntBASIC21.74■■□□□ 1.07
RTCAO00442 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCAO00442 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTCAO00442 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTCAO00442 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.73■■□□□ 1.07
RTCAO00442 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTCAO00442 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTCAO00442 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms