Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIRPB1O00241 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.27■□□□□ 0.68
SIRPB1O00241 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SIRPB1O00241 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.27■□□□□ 0.68
SIRPB1O00241 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SIRPB1O00241 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIRPB1O00241 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
SIRPB1O00241 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SIRPB1O00241 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.27■□□□□ 0.67
SIRPB1O00241 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.26■□□□□ 0.67
SIRPB1O00241 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SIRPB1O00241 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIRPB1O00241 AL161729.1-201ENST00000604104 1402 ntBASIC19.25■□□□□ 0.67
SIRPB1O00241 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SIRPB1O00241 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.25■□□□□ 0.67
SIRPB1O00241 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 KRT18P24-201ENST00000344739 1156 ntBASIC19.25■□□□□ 0.67
SIRPB1O00241 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SIRPB1O00241 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.25■□□□□ 0.67
SIRPB1O00241 MIR4281-201ENST00000580852 62 ntBASIC19.25■□□□□ 0.67
SIRPB1O00241 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.25■□□□□ 0.67
SIRPB1O00241 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPB1O00241 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
SIRPB1O00241 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SIRPB1O00241 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
SIRPB1O00241 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPB1O00241 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SIRPB1O00241 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPB1O00241 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPB1O00241 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPB1O00241 AC131274.2-201ENST00000580697 1507 ntBASIC19.24■□□□□ 0.67
SIRPB1O00241 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPB1O00241 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPB1O00241 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SIRPB1O00241 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPB1O00241 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPB1O00241 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPB1O00241 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.23■□□□□ 0.67
SIRPB1O00241 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.23■□□□□ 0.67
SIRPB1O00241 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
SIRPB1O00241 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 YBX1P4-201ENST00000392794 808 ntBASIC19.22■□□□□ 0.67
SIRPB1O00241 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.22■□□□□ 0.67
SIRPB1O00241 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.22■□□□□ 0.67
SIRPB1O00241 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 MIR4508-201ENST00000584178 70 ntBASIC19.22■□□□□ 0.67
SIRPB1O00241 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPB1O00241 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SIRPB1O00241 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.21■□□□□ 0.67
SIRPB1O00241 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.21■□□□□ 0.67
SIRPB1O00241 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.21■□□□□ 0.67
SIRPB1O00241 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.21■□□□□ 0.67
SIRPB1O00241 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.21■□□□□ 0.67
SIRPB1O00241 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPB1O00241 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPB1O00241 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPB1O00241 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SIRPB1O00241 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPB1O00241 AC103834.1-201ENST00000520383 144 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms