Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RBFOX3A6NFN3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBFOX3A6NFN3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.08■□□□□ 0.48
RBFOX3A6NFN3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RBFOX3A6NFN3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 AL359504.2-201ENST00000605506 1601 ntBASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RBFOX3A6NFN3 AC092068.2-201ENST00000590491 1708 ntBASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RBFOX3A6NFN3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RBFOX3A6NFN3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 AC242852.2-201ENST00000615738 1807 ntBASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RBFOX3A6NFN3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 AL121603.2-201ENST00000557373 2117 ntBASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 AC005559.1-201ENST00000589661 871 ntBASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBFOX3A6NFN3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RBFOX3A6NFN3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RBFOX3A6NFN3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.02■□□□□ 0.48
RBFOX3A6NFN3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.02■□□□□ 0.48
RBFOX3A6NFN3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RBFOX3A6NFN3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RBFOX3A6NFN3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.02■□□□□ 0.47
RBFOX3A6NFN3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBFOX3A6NFN3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18■□□□□ 0.47
RBFOX3A6NFN3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18■□□□□ 0.47
RBFOX3A6NFN3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RBFOX3A6NFN3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18■□□□□ 0.47
RBFOX3A6NFN3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18■□□□□ 0.47
RBFOX3A6NFN3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms